PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019177724.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | AP2 | ||||||||
Protein Properties | Length: 478aa MW: 53088.1 Da PI: 9.4167 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.6 | 1.3e-17 | 154 | 203 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta+ Aa+a++ a++k++g XP_019177724.1 154 SQYRGVTFYRRTGRWESHIWD------SgKQVYLGGFDTAYAAARAYDLAALKFRG 203 78*******************......44************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 478 aa Download sequence |
MLDLNLSVLH CDESAYERLR EGSRADESGT TSSHSSQMNA KISGNAGVED TCSTRGRDVF 60 SLNFEILKAG RGNDDGYESR RVTRPVFVTR QLFPVSEGEL NRVEASGQPD REVNLSFCQA 120 EVGRVEQNHH QQPPPQPQPQ KVKKSRRGPR SRSSQYRGVT FYRRTGRWES HIWDSGKQVY 180 LGGFDTAYAA ARAYDLAALK FRGVDADINF SISEYKDGMK QIKSLNKEEF VHMLRRQSTG 240 FSRGTSKYRG VTLHKCGRWE ARMGQLLGKK AYDKAAIKFN GREAVTNFDP STYDGQTISN 300 PLNEGSQHDL DLNLGIITSS PKENRNTGNL QYHLLHSGTS DMDKSGETKL VSPDLNARLI 360 PSEQPQLCTG VYSNVYPKSE DWQQMASERR MEVCSSQGAL KWGSQRHGHI GTTNMVAMLS 420 AASSGFSTPP TTKSVAVSVS TSPITAPKVT SLNLCFAYPN ASTNTPTQSY YQQVRPPQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.2 | 6e-92 | AP2 family protein |