PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019177663.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | GATA | ||||||||
Protein Properties | Length: 165aa MW: 17487.8 Da PI: 10.9479 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 60 | 3e-19 | 35 | 69 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+ CgttkTplWR gp g+k+LCnaCG++ rkk++ XP_019177663.1 35 CADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRR 69 ********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 165 aa Download sequence |
MADLSDRGSE SEEMNNQAQT PDRVSSETSG QIKTCADCGT TKTPLWRGGP AGPKSLCNAC 60 GIRSRKKRRA LLGLNKDDKK PKKASGNKNT IAAPQNSGTT SDSGSSSGGK IGGVPQPVRR 120 KLVPFGIGKQ VALQRPRSQQ QRRKIGEVER AAFVLMSLSC GSVYA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49300.1 | 4e-33 | GATA family protein |