PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019177250.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 467aa MW: 51179.2 Da PI: 4.2262

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019177250.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	63.6	6.1e-20	2	54	75	128
NAM 75 nratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 nrat++gyWk+tg+d++v+ ++++vg+ ktLvf++g+apkg++tdWv+heyr+ XP_019177250.1 2 NRATETGYWKTTGRDRPVVY-NERTVGMVKTLVFHEGHAPKGKRTDWVIHEYRI 54 8*****************.999**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MNRATETGYW KTTGRDRPVV YNERTVGMVK TLVFHEGHAP KGKRTDWVIH EYRIEDEETL 60 QDSYVLCKVF KKSGPGPKNG AQYGAPFNEE DWEDCENCDI PFAIPMHPSN QNCSSVTGMI 120 DPECSSRQPS SEPGSSAIPP AKLPDPINQN CTYVADMIDP GCSSRQPSNE PGPSLSRLHA 180 DEVRPNNQNC SVFTGTIDPG NTCSRSLANP GPSLAVPHSS EVPPDDDDIS QFFASFLEDT 240 DLLPIENNEN VNCCNQGLNV DMMPCMDGND VYTAFGGRDN FADLSGGRSY PSGSLVGDHP 300 PNLLFPQDDA PFLELNDLVI PVDHCTRTSE ADPLVEENLY SSNASFLRME HFNYGGNFSG 360 GNQFIPTQSQ LQVLPQHYTQ QVTGIGFNAS QGYNTMPVTG MEFNASQGYN AMQVSGIEFN 420 ASQGYNAMQV SGIEFNASQG FDYGFDTMMH EHGMITSPAA DRDQHRG

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MNRATETGYW KTTGRDRPVV YNERTVGMVK TLVFHEGHAP KGKRTDWVIH EYRIEDEETL  60
QDSYVLCKVF KKSGPGPKNG AQYGAPFNEE DWEDCENCDI PFAIPMHPSN QNCSSVTGMI  120
DPECSSRQPS SEPGSSAIPP AKLPDPINQN CTYVADMIDP GCSSRQPSNE PGPSLSRLHA  180
DEVRPNNQNC SVFTGTIDPG NTCSRSLANP GPSLAVPHSS EVPPDDDDIS QFFASFLEDT  240
DLLPIENNEN VNCCNQGLNV DMMPCMDGND VYTAFGGRDN FADLSGGRSY PSGSLVGDHP  300
PNLLFPQDDA PFLELNDLVI PVDHCTRTSE ADPLVEENLY SSNASFLRME HFNYGGNFSG  360
GNQFIPTQSQ LQVLPQHYTQ QVTGIGFNAS QGYNTMPVTG MEFNASQGYN AMQVSGIEFN  420
ASQGYNAMQV SGIEFNASQG FDYGFDTMMH EHGMITSPAA DRDQHRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09330.3	7e-35	NAC family protein