PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019177246.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 547aa MW: 60857.4 Da PI: 4.5687

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019177246.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.1	5.1e-51	6	134	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtd e++v+yLk+k+ gkkl+++e+i+e++iy++ PwdLp k ++k+++ ewyfF++r++ky++g r nrat++gyWk+tg+d++v+ XP_019177246.1 6 LPPGFRFHPTDVEIIVYYLKRKIMGKKLHFFEAISEINIYRFSPWDLPdKsSLKSKDLEWYFFCPRERKYNSGGRMNRATETGYWKTTGRDRPVV 100 79*******************************************95346667777*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+ ktLvf++g+apkg++tdWv+heyr+ XP_019177246.1 101 Y-NERTVGMVKTLVFHEGHAPKGKRTDWVIHEYRI 134 .999***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 547 aa Download sequence
MGRTFLPPGF RFHPTDVEII VYYLKRKIMG KKLHFFEAIS EINIYRFSPW DLPDKSSLKS 60 KDLEWYFFCP RERKYNSGGR MNRATETGYW KTTGRDRPVV YNERTVGMVK TLVFHEGHAP 120 KGKRTDWVIH EYRIEDEETL QDSYVLCKVF KKSGPGPKNG AQYGAPFNEE DWEDCENCDI 180 PFAIPMHPSN QNCSSVTGMI DPECSSRQPS SEPGSSAIPP AKLPDPINQN CTYVADMIDP 240 GCSSRQPSNE PGPSLSRLHA DEVRPNNQNC SVFTGTIDPG NTCSRSLANP GPSLAVPHSS 300 EVPPDDDDIS QFFASFLEDT DLLPIENNEN VNCCNQGLNV DMMPCMDGND VYTAFGGRDN 360 FADLSGGRSY PSGSLVGDHP PNLLFPQDDA PFLELNDLVI PVDHCTRTSE ADPLVEENLY 420 SSNASFLRME HFNYGGNFSG GNQFIPTQSQ LQVLPQHYTQ QVTGIGFNAS QGYNTMPVTG 480 MEFNASQGYN AMQVSGIEFN ASQGYNAMQV SGIEFNASQG FDYGFDTMMH EHGMITSPAA 540 DRDQHRG

Sequence ? help Back to Top

Protein Sequence Length: 547 aa Download sequence

MGRTFLPPGF RFHPTDVEII VYYLKRKIMG KKLHFFEAIS EINIYRFSPW DLPDKSSLKS  60
KDLEWYFFCP RERKYNSGGR MNRATETGYW KTTGRDRPVV YNERTVGMVK TLVFHEGHAP  120
KGKRTDWVIH EYRIEDEETL QDSYVLCKVF KKSGPGPKNG AQYGAPFNEE DWEDCENCDI  180
PFAIPMHPSN QNCSSVTGMI DPECSSRQPS SEPGSSAIPP AKLPDPINQN CTYVADMIDP  240
GCSSRQPSNE PGPSLSRLHA DEVRPNNQNC SVFTGTIDPG NTCSRSLANP GPSLAVPHSS  300
EVPPDDDDIS QFFASFLEDT DLLPIENNEN VNCCNQGLNV DMMPCMDGND VYTAFGGRDN  360
FADLSGGRSY PSGSLVGDHP PNLLFPQDDA PFLELNDLVI PVDHCTRTSE ADPLVEENLY  420
SSNASFLRME HFNYGGNFSG GNQFIPTQSQ LQVLPQHYTQ QVTGIGFNAS QGYNTMPVTG  480
MEFNASQGYN AMQVSGIEFN ASQGYNAMQV SGIEFNASQG FDYGFDTMMH EHGMITSPAA  540
DRDQHRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09330.3	1e-76	NAC family protein