PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019177242.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NF-YB | ||||||||
Protein Properties | Length: 238aa MW: 26731.9 Da PI: 7.2075 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 179.5 | 3.1e-56 | 42 | 137 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 +eqdrflPianv+rimkkv+P+n+kisk+aketvqecvsefisfvt+easdkcqrekrktingdd+lwa++tlGfedyv+plk+yl+kyrelege XP_019177242.1 42 KEQDRFLPIANVGRIMKKVIPGNGKISKEAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDILWAITTLGFEDYVNPLKLYLNKYRELEGE 136 89*******************************************************************************************99 PP NF-YB 97 k 97 k XP_019177242.1 137 K 137 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MMTTTTAEND ERKTGNIPNL AVVRASPESK PTNSANNNNN SKEQDRFLPI ANVGRIMKKV 60 IPGNGKISKE AKETVQECVS EFISFVTGEA SDKCQREKRK TINGDDILWA ITTLGFEDYV 120 NPLKLYLNKY RELEGEKLNL PKQPPPPQQQ LQQQHHVHDQ LLPPTAAANL AYNATATNVY 180 SPSPATLLSH HHQPSYMSPS DHHHHLLHQQ FPNLPFSPQN SVQSQLTPQE HIDSVGHW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G13570.1 | 3e-68 | NF-YB family protein |