PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019177241.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family Dof
Protein Properties Length: 288aa    MW: 30302.6 Da    PI: 9.2729
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019177241.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof121.82.3e-3865124362
          zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                     e+ lkcprCdstntkfCy+nnysl+qPr+fCk+CrryWt+GGalr vPvGgg+r+nk+s+
  XP_019177241.1  65 EAGLKCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSK 124
                     6779*****************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MVFSSFPAVY LDHPNLHQQS EQHQRGGGFE NPPLQAAAPA GGGAGSIRPG SMVDRARLAK  60
IPLPEAGLKC PRCDSTNTKF CYFNNYSLTQ PRHFCKTCRR YWTRGGALRS VPVGGGCRRN  120
KRSKSGNHGA KSGSAGAAAA AASSEKQADG GGGSNSTCAS PTDITGHFPQ LPFMAAAAAF  180
QNLNHYGGSG SLGGFQPPQL AATSGAGIGE MGFHLPVLTG FEQPPHTNVY PPFHSEGIEA  240
SSSVKMEENR QGLNNSTKQF LGTLENNQYW GWSGFSGLNS SSSTTHLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.12e-49Dof family protein