PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019177233.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | Dof | ||||||||
Protein Properties | Length: 290aa MW: 30543.9 Da PI: 9.2729 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 121.8 | 2.4e-38 | 67 | 126 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e+ lkcprCdstntkfCy+nnysl+qPr+fCk+CrryWt+GGalr vPvGgg+r+nk+s+ XP_019177233.1 67 EAGLKCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSK 126 6779*****************************************************987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 290 aa Download sequence |
MVFSSFPAVY LDHPNLHQLQ QSEQHQRGGG FENPPLQAAA PAGGGAGSIR PGSMVDRARL 60 AKIPLPEAGL KCPRCDSTNT KFCYFNNYSL TQPRHFCKTC RRYWTRGGAL RSVPVGGGCR 120 RNKRSKSGNH GAKSGSAGAA AAAASSEKQA DGGGGSNSTC ASPTDITGHF PQLPFMAAAA 180 AFQNLNHYGG SGSLGGFQPP QLAATSGAGI GEMGFHLPVL TGFEQPPHTN VYPPFHSEGI 240 EASSSVKMEE NRQGLNNSTK QFLGTLENNQ YWGWSGFSGL NSSSSTTHLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G55370.1 | 9e-48 | Dof family protein |