PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019176842.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 322aa    MW: 36527.9 Da    PI: 6.8826
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019176842.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM171.13.5e-5351331129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhP+deel+++yL +kv++ ++++ ++i +vd++k ePwdLp k++ +ek+wyfFs +d+ky+tg r+nrat++gyWk+tgkdke+++ 
  XP_019176842.1   5 LPPGFRFHPSDEELITYYLSNKVSDFTFTA-KAIVDVDLNKNEPWDLPGKASMGEKQWYFFSLKDRKYPTGLRTNRATEAGYWKTTGKDKEIFCG 98 
                     79*************************999.88***************988999***************************************98 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129
                      +g lvg+kktLvfy+grapkg k++Wvmheyrle
  XP_019176842.1  99 tSGVLVGMKKTLVFYRGRAPKGLKSNWVMHEYRLE 133
                     67788****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MEGNLPPGFR FHPSDEELIT YYLSNKVSDF TFTAKAIVDV DLNKNEPWDL PGKASMGEKQ  60
WYFFSLKDRK YPTGLRTNRA TEAGYWKTTG KDKEIFCGTS GVLVGMKKTL VFYRGRAPKG  120
LKSNWVMHEY RLENKHGFKP TKEEWVVCRV FEKSSIAKKP QATSSSPQSP ESPCDTTTFA  180
SELLEDIDPP NHLPNIISWQ QNNNYFNNNN TPITTLPLLP WPPALLSTTT NLSSVNSMLF  240
RALQLRAANQ ARDQQAIATT FGYSHTPQES ENHHLLAQFE NDFISSTNNY AVTTASSSMV  300
LDSVNQQEPP LEQPYRLDSN IW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.12e-98NAC family protein