PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019176841.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 361aa MW: 40952.1 Da PI: 7.3318

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019176841.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.5	6.8e-50	45	170	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekewyf+++rd+ky++g+r+nr+t+sgyWkatg d+ + s++ XP_019176841.1 45 MPGFRFHPTEEELVEFYLRRKVEGKPFNV-ELITFLDLYRYDPWELPALAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRVIRSEN 138 79*************************.89***********8778899************************************* PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +glkktLvfy+g+apkg +t+W+m+eyrl XP_019176841.1 139 FRSIGLKKTLVFYTGKAPKGIRTSWIMNEYRL 170 ****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MAIVPSRMSQ QDESSNTTTT NNNNHHRRHE EDDEETDDHE HDVVMPGFRF HPTEEELVEF 60 YLRRKVEGKP FNVELITFLD LYRYDPWELP ALAAIGEKEW YFYVPRDRKY RNGDRPNRVT 120 TSGYWKATGA DRVIRSENFR SIGLKKTLVF YTGKAPKGIR TSWIMNEYRL PHHDTERLQK 180 AEISLCRVYK RAGVEDHLPL PRSLPTARAT ASTCRPPPHA AKKPPHHHSL PPFEFPRTTA 240 NMEAAATSLV LSQPTNSMNS YTPAPPPPLA VAASEEEKLL LTSPAVVFPG GSSSPAPFAA 300 VDDLHRLVNL HQAAAAPQHF LTPQFPPLHL QPPLSFPDRL WDWSSLAAEQ NKDYGAANPF 360 K

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MAIVPSRMSQ QDESSNTTTT NNNNHHRRHE EDDEETDDHE HDVVMPGFRF HPTEEELVEF  60
YLRRKVEGKP FNVELITFLD LYRYDPWELP ALAAIGEKEW YFYVPRDRKY RNGDRPNRVT  120
TSGYWKATGA DRVIRSENFR SIGLKKTLVF YTGKAPKGIR TSWIMNEYRL PHHDTERLQK  180
AEISLCRVYK RAGVEDHLPL PRSLPTARAT ASTCRPPPHA AKKPPHHHSL PPFEFPRTTA  240
NMEAAATSLV LSQPTNSMNS YTPAPPPPLA VAASEEEKLL LTSPAVVFPG GSSSPAPFAA  300
VDDLHRLVNL HQAAAAPQHF LTPQFPPLHL QPPLSFPDRL WDWSSLAAEQ NKDYGAANPF  360
K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.2	1e-108	NAC family protein