PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019176765.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 192aa MW: 21907.4 Da PI: 9.0603 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 81.3 | 6.6e-26 | 9 | 56 | 1 | 48 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48 kri+n rqvtf+kRr g+lKKA+ELSvLCdaevav++fs +gkly+ XP_019176765.1 9 KRISNPVHRQVTFCKRRGGLLKKAKELSVLCDAEVAVLVFSAHGKLYD 56 79********************************************97 PP | |||||||
2 | K-box | 48.8 | 3e-17 | 85 | 167 | 7 | 89 |
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqe 89 ++ e++ + ++e++ Lk+ i Lq+ +R + G +++++s+ L Le+ Le + ++Rs K+ l++++i+ l++k +e ++ XP_019176765.1 85 QEPREKHVQDAKEEINMLKNGITILQEGLRFMHGGGIGTMSIYKLDALEKYLEGWMHHVRSAKMGLMFQEIQLLKNKVDEEHR 167 45678999*********************************************************************998776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MGRGKTELKR ISNPVHRQVT FCKRRGGLLK KAKELSVLCD AEVAVLVFSA HGKLYDLATQ 60 GNMQGMIDKY VNFTRGARVT EVSEQEPREK HVQDAKEEIN MLKNGITILQ EGLRFMHGGG 120 IGTMSIYKLD ALEKYLEGWM HHVRSAKMGL MFQEIQLLKN KVDEEHRTMI TSMSSIVTEN 180 DIFIMPTSWT DY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71692.1 | 4e-59 | MIKC_MADS family protein |