PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019176692.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 440aa MW: 49287.6 Da PI: 6.3271

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019176692.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	79.4	4.3e-25	89	142	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++Wt eLH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_019176692.1 89 KPRVVWTVELHQKFVKAVNQI-GFDKVGPKKILDLMGVPWLTRENVASHLQKYRL 142 79*****************.9*****************************8 PP
2	Myb_DNA-binding	43.7	6.5e-14	91	141	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r WT e+++++v+av+q G + +k+I mg +t++++ s++qky+ XP_019176692.1 91 RVVWTVELHQKFVKAVNQIGFDkvGPKKILDLMGvPWLTRENVASHLQKYR 141 678***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MKGVQHGACD YLLKPIRMKE LRNIWQHVVR KRMQESRDID NHESDQFDEA WMLNGIELQS 60 GKKRKDFDYK FDERETSDSK SGDPSSAKKP RVVWTVELHQ KFVKAVNQIG FDKVGPKKIL 120 DLMGVPWLTR ENVASHLQKY RLYLTRLQKE NELKASSSGT KHPDLSPKES SSSACLQNLV 180 DVKPSKSTNG KYSFPGENFF VQEVESRNYE GEVKAAASLS TAGVSDSQKS ISCSKASCVP 240 VDSVDLEHAG EIPIQYCWAS EVSKTGFKHE FKPPQIQTED NVNHLPSPKL PQHVQLDQAQ 300 PLLNLAPHKD INPGEIKSKP TKTPGVRTVS PLECAVDLLP AQPQSCLTNF QAFEQIPSTT 360 WSMKIPESIE GNLFLGGGSW DKDFNAAALQ GEFHSPCVVG PQSLELLDYS NTNLTGEIQP 420 YLYDYEYAID PVIDHGLFIL

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MKGVQHGACD YLLKPIRMKE LRNIWQHVVR KRMQESRDID NHESDQFDEA WMLNGIELQS  60
GKKRKDFDYK FDERETSDSK SGDPSSAKKP RVVWTVELHQ KFVKAVNQIG FDKVGPKKIL  120
DLMGVPWLTR ENVASHLQKY RLYLTRLQKE NELKASSSGT KHPDLSPKES SSSACLQNLV  180
DVKPSKSTNG KYSFPGENFF VQEVESRNYE GEVKAAASLS TAGVSDSQKS ISCSKASCVP  240
VDSVDLEHAG EIPIQYCWAS EVSKTGFKHE FKPPQIQTED NVNHLPSPKL PQHVQLDQAQ  300
PLLNLAPHKD INPGEIKSKP TKTPGVRTVS PLECAVDLLP AQPQSCLTNF QAFEQIPSTT  360
WSMKIPESIE GNLFLGGGSW DKDFNAAALQ GEFHSPCVVG PQSLELLDYS NTNLTGEIQP  420
YLYDYEYAID PVIDHGLFIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	4e-63	ARR-B family protein