PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019176690.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ARR-B | ||||||||
Protein Properties | Length: 497aa MW: 55551.3 Da PI: 5.6995 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 79.2 | 5.1e-25 | 198 | 251 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++Wt eLH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_019176690.1 198 KPRVVWTVELHQKFVKAVNQI-GFDKVGPKKILDLMGVPWLTRENVASHLQKYRL 251 79*******************.9*******************************8 PP | |||||||
2 | Myb_DNA-binding | 43.4 | 7.7e-14 | 200 | 250 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r WT e+++++v+av+q G + +k+I mg +t++++ s++qky+ XP_019176690.1 200 RVVWTVELHQKFVKAVNQIGFDkvGPKKILDLMGvPWLTRENVASHLQKYR 250 678***********************************************7 PP | |||||||
3 | Response_reg | 80.2 | 7e-27 | 24 | 132 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l+k y ev+++ ++ea+ ll+e++ +D+++ D++mp+mdG++ll+ e++lp+i+++ ge + + + ++ G XP_019176690.1 24 VLVVDDDPTWLKILEKMLKKCSY-EVTTCGLATEAIGLLRERRngFDIVISDVNMPDMDGFKLLELVGL-EMDLPVIMMSVDGETSRVMKGVQHG 116 89*********************.***************999999*******************87754.558********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ ++el++ XP_019176690.1 117 ACDYLLKPIRMKELRN 132 *************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 497 aa Download sequence |
MESVMAGGIF LPRSSETFPA GLRVLVVDDD PTWLKILEKM LKKCSYEVTT CGLATEAIGL 60 LRERRNGFDI VISDVNMPDM DGFKLLELVG LEMDLPVIMM SVDGETSRVM KGVQHGACDY 120 LLKPIRMKEL RNIWQHVVRK RMQESRDIDN HESDQFDEAW MLNGIELQSG KKRKDFDYKF 180 DERETSDSKS GDPSSAKKPR VVWTVELHQK FVKAVNQIGF DKVGPKKILD LMGVPWLTRE 240 NVASHLQKYR LYLTRLQKEN ELKASSSGTK HPDLSPKESS SSACLQNLVD VKPSKSTNGK 300 YSFPGENFFV QEVESRNYEG EVKAAASLST AGVSDSQKSI SCSKAKLPQH VQLDQAQPLL 360 NLAPHKDINP GEIKSKPTKT PGVRTVSPLE CAVDLLPAQP QSCLTNFQAF EQIPSTTWSM 420 KIPESIEGNL FLGGGSWDKD FNAAALQGEF HSPCVVGPQS LELLDYSNTN LTGEIQPYLY 480 DYEYAIDPVI DHGLFIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67710.1 | 1e-127 | ARR-B family protein |