PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019176687.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ARR-B | ||||||||
Protein Properties | Length: 549aa MW: 61338.8 Da PI: 5.4072 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 79 | 5.9e-25 | 198 | 251 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++Wt eLH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_019176687.1 198 KPRVVWTVELHQKFVKAVNQI-GFDKVGPKKILDLMGVPWLTRENVASHLQKYRL 251 79*******************.9*******************************8 PP | |||||||
2 | Myb_DNA-binding | 43.3 | 8.7e-14 | 200 | 250 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r WT e+++++v+av+q G + +k+I mg +t++++ s++qky+ XP_019176687.1 200 RVVWTVELHQKFVKAVNQIGFDkvGPKKILDLMGvPWLTRENVASHLQKYR 250 678***********************************************7 PP | |||||||
3 | Response_reg | 79.9 | 8.3e-27 | 24 | 132 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l+k y ev+++ ++ea+ ll+e++ +D+++ D++mp+mdG++ll+ e++lp+i+++ ge + + + ++ G XP_019176687.1 24 VLVVDDDPTWLKILEKMLKKCSY-EVTTCGLATEAIGLLRERRngFDIVISDVNMPDMDGFKLLELVGL-EMDLPVIMMSVDGETSRVMKGVQHG 116 89*********************.***************999999*******************87754.558********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ ++el++ XP_019176687.1 117 ACDYLLKPIRMKELRN 132 *************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 549 aa Download sequence |
MESVMAGGIF LPRSSETFPA GLRVLVVDDD PTWLKILEKM LKKCSYEVTT CGLATEAIGL 60 LRERRNGFDI VISDVNMPDM DGFKLLELVG LEMDLPVIMM SVDGETSRVM KGVQHGACDY 120 LLKPIRMKEL RNIWQHVVRK RMQESRDIDN HESDQFDEAW MLNGIELQSG KKRKDFDYKF 180 DERETSDSKS GDPSSAKKPR VVWTVELHQK FVKAVNQIGF DKVGPKKILD LMGVPWLTRE 240 NVASHLQKYR LYLTRLQKEN ELKASSSGTK HPDLSPKESS SSACLQNLVD VKPSKSTNGK 300 YSFPGENFFV QEVESRNYEG EVKAAASLST AGVSDSQKSI SCSKASCVPV DSVDLEHAGE 360 IPIQYCWASE VSKTGFKHEF KPPQIQTEDN VNHLPSPKLP QHVQLDQAQP LLNLAPHKDI 420 NPGEIKSKPT KTPGVRTVSP LECAVDLLPA QPQSCLTNFQ AFEQIPSTTW SMKIPESIEG 480 NLFLGGGSWD KDFNAAALQG EFHSPCVVGP QSLELLDYSN TNLTGEIQPY LYDYEYAIDP 540 VIDHGLFIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67710.1 | 1e-126 | ARR-B family protein |