PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019176641.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 333aa MW: 37468.8 Da PI: 4.7372

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019176641.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.3	1.3e-08	276	310	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 + +yp+++++ LA+ +gL+++q+ +WF N+R ++ XP_019176641.1 276 RWPYPTEDDKISLAELTGLDQKQINNWFINQRKRH 310 469*****************************885 PP
2	ELK	35.3	2.5e-12	230	251	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +Ll+KY+g+++sLk EFs XP_019176641.1 230 ELKSRLLQKYGGHISSLKLEFS 251 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MDGMFGFHST PDYGDRALMS PENLMDCGYS YNGLISPSAP DRIPVFASDD PTATGSFPCS 60 VVSEAASVAP DVYRRGGGGG RREDAAGEKE DDDDHGIGLI KAKIASHPSY PKLLEAYIDC 120 QKVGAPPEIA SFLDEIRREN DLFKHDSRVS TCFGDDPELD IFMETYCDIL VKYKSDLSRP 180 FDEAKTFLNK IETQLSNLCK DDGVVSSDDD EYSGGEAEEQ DSAVKGEDRE LKSRLLQKYG 240 GHISSLKLEF SKKKKKGKLP KDARQILLEW WKGHYRWPYP TEDDKISLAE LTGLDQKQIN 300 NWFINQRKRH WKPSEHMQLA VMDNLAGQFF TQD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-118	TALE family protein