PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019176624.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family C2H2
Protein Properties Length: 412aa    MW: 47176 Da    PI: 5.6491
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019176624.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2163.3e-056892123
                    EEETTTTEEESSHHHHHHHHHH..T CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirt..H 23
                    y+C+ Cgk ++++  + +H+++  H
  XP_019176624.1 68 YTCGVCGKEYRSSQAYSQHLKSksH 92
                    9*******************98666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    
MPGLTCNACN KEFKDDAEQK LHYKSEWHRY NLKRKVAGVP GVTEALFLAR QSVIAEEKKK  60
LTETPMLYTC GVCGKEYRSS QAYSQHLKSK SHLLKASQEP NHNGENRVII RPLQRPILDR  120
STQQVEEDID ESEESEESEW EEVDEEDMAE ASDSLMQLQL NEHTSNGNMQ DADMDDYSEE  180
LDPSCCFMCD LKHRTIERCM VHMHKQHGFF IPDVEYLKDP KGFLTYVGLK VKRDYLCLYC  240
NDRCQPFSSL EGVRKHMEAK SHCKVHYGDG GDDEEAELEE FYDYSSSYLD ANGKELVASD  300
DTSSGVELGS GGAELIIKKR TDDGVSTITL GSREYLRYYR QKLRPTRTND IALTAALASR  360
YRSMGLATVQ SRENMVKMKV MKAMNRYGNE AMRTKIGIRN NVIRNLPNNV PY