PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019176568.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 341aa    MW: 38840.7 Da    PI: 10.2676
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019176568.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.21.7e-1420961398
                    TT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3 13 sgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                    ++ + +p  f++++ +g+     +  +  +  r+W+vk+  r+++   +l++GW++F+ +ng  +gDfvvF+ ++++ f   v+vf+
  XP_019176568.1 20 KNGVNIPTAFLAKYlKGQD---PKFAILRRGDRRWRVKI--RGGR---MLADGWEKFAAENGFVVGDFVVFRQERDTVF--DVSVFE 96
                    45599*********74443...368888999********..7776...8***********************5555555..887776 PP
2B359.94.4e-19134219391
                     EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
              B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                       +++++ lk ++l+lp +fa+++g++ +e+++++l+d + rsW+v l  r+ + ++ + kGW+ F  angLkegD   F+l+++ +++
  XP_019176568.1 134 VSTIKPYCLKAQQLYLPMEFARSNGLVAKEKREMILRDDKERSWSVVL--RRDGYHFGILKGWQAFRVANGLKEGDAYKFELIKT-GKT 219
                     55679999****************************************..9999889999*********************9984.443 PP
3B360.92.2e-19242330495
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ++++++ l++++l+lp +fa+++g++ ee+++++l+d + rsW+v l   +++ ++ l +GW+ F  a+gLkegD   F+l++ s++++  k
  XP_019176568.1 242 ATIQPYCLRRSNLYLPLEFARSNGLVGEEKREMILRDDKERSWTVVL--GRTGHHVALMGGWRAFQMAKGLKEGDAYKFELIK-SGKKPIAK 330
                     5679999****************9999999*****************..999999**************************98.66666655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MKTIPPQNPH FFKPIFKGFK NGVNIPTAFL AKYLKGQDPK FAILRRGDRR WRVKIRGGRM  60
LADGWEKFAA ENGFVVGDFV VFRQERDTVF DVSVFEPSLC ERDFPLPVPQ PSNNFCSAAR  120
DTTSTSPADH PYFVSTIKPY CLKAQQLYLP MEFARSNGLV AKEKREMILR DDKERSWSVV  180
LRRDGYHFGI LKGWQAFRVA NGLKEGDAYK FELIKTGKTP IAKLHLLGTT SSSSAENPHF  240
VATIQPYCLR RSNLYLPLEF ARSNGLVGEE KREMILRDDK ERSWTVVLGR TGHHVALMGG  300
WRAFQMAKGL KEGDAYKFEL IKSGKKPIAK FHSGHFSGEE D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.13e-60B3 family protein