PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019176054.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 441aa MW: 49239.2 Da PI: 9.5248

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019176054.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.8	3.9e-31	111	164	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+a+++LGG+e+AtPk +l+lm+v gL+++hvkSHLQ+YR+ XP_019176054.1 111 PRLRWTPDLHLSFVHAIQRLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRS 164 8****************************************************7 PP
2	Myb_DNA-binding	45.9	1.3e-14	112	163	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+a+++lGg t+k++ + m+ g++ ++ks++q+y+ XP_019176054.1 112 RLRWTPDLHLSFVHAIQRLGGQeraTPKLVLQLMNvRGLSIAHVKSHLQMYR 163 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MNKNIGGGME AGLSGEMQEK EKTPLLSPET CSSESKGMAS IDLNSRMDGG EDDDDDDDDV 60 ELLSEKAGPD GNSSANNSSS FSGELEGNNG NGNGGDEKKS SVRPYVRSKI PRLRWTPDLH 120 LSFVHAIQRL GGQERATPKL VLQLMNVRGL SIAHVKSHLQ MYRSKKLDAS GQVLGQAKRG 180 FKGRSYGYGD MNCRFIPHQH FKMQNGAIVL TRTFEDGRHQ MLNNNIARHS MFQSPTYDLK 240 SIISRYQQRS SSNQESVLLK LSGAAKMEDH REGNVLRMRM LHQHQEKLPL SYAPKDHQLQ 300 YSSPASNGSH HHQIVPIRPS QFLEEKRWPP RGSMAANHLK EKPATFTTCG LWSNAATPQP 360 LLHHTIPAGT NSRFSTLGPS FDPPFRRLEM MNKEKMSFKE NGRLLDLQLR LSQSGDDNNN 420 NNGEKSYKKE GDINTMLSLS L

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MNKNIGGGME AGLSGEMQEK EKTPLLSPET CSSESKGMAS IDLNSRMDGG EDDDDDDDDV  60
ELLSEKAGPD GNSSANNSSS FSGELEGNNG NGNGGDEKKS SVRPYVRSKI PRLRWTPDLH  120
LSFVHAIQRL GGQERATPKL VLQLMNVRGL SIAHVKSHLQ MYRSKKLDAS GQVLGQAKRG  180
FKGRSYGYGD MNCRFIPHQH FKMQNGAIVL TRTFEDGRHQ MLNNNIARHS MFQSPTYDLK  240
SIISRYQQRS SSNQESVLLK LSGAAKMEDH REGNVLRMRM LHQHQEKLPL SYAPKDHQLQ  300
YSSPASNGSH HHQIVPIRPS QFLEEKRWPP RGSMAANHLK EKPATFTTCG LWSNAATPQP  360
LLHHTIPAGT NSRFSTLGPS FDPPFRRLEM MNKEKMSFKE NGRLLDLQLR LSQSGDDNNN  420
NNGEKSYKKE GDINTMLSLS L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	2e-37	G2-like family protein