PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019175748.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

HB-other

Protein Properties

Length: 1675aa MW: 188112 Da PI: 4.9544

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019175748.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.1	1.5e-18	25	80	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR+ t+ qle+Le++++++ yps++ r eL++klgLt+rq ++WF+ rR k+kk XP_019175748.1 25 PKRQMKTPFQLETLEKVYAMETYPSEAIRGELSEKLGLTDRQLQMWFCHRRLKDKK 80 69****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1675 aa Download sequence
MEGGSEGESN KNAQHSPSDG QTKKPKRQMK TPFQLETLEK VYAMETYPSE AIRGELSEKL 60 GLTDRQLQMW FCHRRLKDKK EAAGVAAMKP RVGPNGGACG KRSFSELTRD EVTIPEPGSD 120 HRSGSGSGSG SGSGSSQFDN GDDMPTMPVR YYESPRTAKE RKIIACIESQ LGEPLRSDAP 180 ILGVEFDELP PGAFGAPIVP TERRDHYRHS YDTKLFGGYE PKQYNALPSG LHEPAEPKIR 240 SDGYDQIAPS YLYGSPARGP TKPLSVMKAN GHFSREYTVE SQASTVNVLP QHGFQGQFPS 300 PPRESEFITP NEGTLQMDHE RKNDEARIGR EALAHEKRIR KELEKQDLLR RKREEQVKKE 360 MERLDRERRK EEQRLMREQQ RKEERFQREE KREMERREKF LQRELLRAER KRQKEELRKE 420 REAAKQKAAM ERAAARKFAK EAMELIEDER LELMELAASN KGLSSIASLD YDTLQNLELY 480 REFLCEFPPK SIEMKRPFSI QPWIDSQENI GNLLMAWRFC INFADVLGLW PFTLDEFVQA 540 FHDYDSRLLS EIHIALLKLI IKDIEDVVRT PSGGPGTNQY NAVNPEGGHP QIVEGAYVWG 600 FDICNWQKHL NPLTWPEVLR QFALSAGFGP QLKKKSKEQG GLNDNDETKG CEDIVSTLRS 660 GSAAENAVAI MHEKGFMLQR KSRHRLTPGT VKFAAYHLLA LEGEKGLNVI ELAEKIQKSG 720 LRDLTTSKTP EASISVALSR DPVLFERIAP STYCVRPAFR KDPANAEEII SVAREKIQRY 780 VNGFLAGQNA DDEERDDDSE CDAADGQEID DIGTPSDVIK NTDLQNDVGT CSVNGKDNPS 840 VEVDKKNGFD TVGIGGSNPG QEGGEIDESQ SGEPWVQGLT EGEYSNLCVE ERLNALVAVI 900 GIANEGNTIR AILEDRLDAA TALKKQMWAE AQLDRRRMKE ENIIKFHDSS FGAAAEGSHS 960 PFTLPDNKVH EPAQAAVVND ASVGLDNAQN QLELLPAEKS LAPQDFSTSS FISSIQPSGY 1020 TAERSRMQLK SFIGHKAEEM YVYRSLPLGQ DRRRNRYWLF VASGSSHDPG SGRIFVESPA 1080 GFWRLIDTEE AFDALLTSLD TRGLRESHLH IMMKKIEIPF RERVRRNTLQ NGSVVQCGNA 1140 SRNEAAEASS GGDSPSSMVC STSSDRWEPS FKIELGKNEE GKRNALRRYQ DFQIWMWKEH 1200 FGSSVLCALA HGQKRCLPLL GVCDRCLDTF LFEEDFCSSC HRTFANVDFV VKLLESEIGY 1260 GDIIQFDSEN VVISSTSCPL RILLIKALLS MLEVSIPREA LQSSWTEDTR RIWGLNLHNS 1320 SSTEDLLQIL TQLEGFVKQD YLSSNFETTK ELLRHYAASS RAPACQYVSQ LPWIPLTTAA 1380 VALRLFEFDA SVSYDPEPKA EPCNGLKVES FPKSPMGYAS INDIQKGEST ALDRGVHRKE 1440 ENWNYLGTTP GSSRGKQMAR GRGGGRPRGR LPKGSARSAS ESTTPVPRRG EMLTQALMQQ 1500 GETQVQKHMR GRRTVRRRRE TNLVIDDIHH DYLGDENNHR SVAESPESPR GRDDLMDINM 1560 ERTPAGNDNN SNSGEAMESD DSAQENPYEF GKWDPHFNAS NRSNELMEMS DEDADNTSND 1620 EEEEEDDDDG YRDEDGRNLE SGGDLDMEDN GEDELDRNGD DDQGSESDAS GDYSD

Sequence ? help Back to Top

Protein Sequence Length: 1675 aa Download sequence

MEGGSEGESN KNAQHSPSDG QTKKPKRQMK TPFQLETLEK VYAMETYPSE AIRGELSEKL  60
GLTDRQLQMW FCHRRLKDKK EAAGVAAMKP RVGPNGGACG KRSFSELTRD EVTIPEPGSD  120
HRSGSGSGSG SGSGSSQFDN GDDMPTMPVR YYESPRTAKE RKIIACIESQ LGEPLRSDAP  180
ILGVEFDELP PGAFGAPIVP TERRDHYRHS YDTKLFGGYE PKQYNALPSG LHEPAEPKIR  240
SDGYDQIAPS YLYGSPARGP TKPLSVMKAN GHFSREYTVE SQASTVNVLP QHGFQGQFPS  300
PPRESEFITP NEGTLQMDHE RKNDEARIGR EALAHEKRIR KELEKQDLLR RKREEQVKKE  360
MERLDRERRK EEQRLMREQQ RKEERFQREE KREMERREKF LQRELLRAER KRQKEELRKE  420
REAAKQKAAM ERAAARKFAK EAMELIEDER LELMELAASN KGLSSIASLD YDTLQNLELY  480
REFLCEFPPK SIEMKRPFSI QPWIDSQENI GNLLMAWRFC INFADVLGLW PFTLDEFVQA  540
FHDYDSRLLS EIHIALLKLI IKDIEDVVRT PSGGPGTNQY NAVNPEGGHP QIVEGAYVWG  600
FDICNWQKHL NPLTWPEVLR QFALSAGFGP QLKKKSKEQG GLNDNDETKG CEDIVSTLRS  660
GSAAENAVAI MHEKGFMLQR KSRHRLTPGT VKFAAYHLLA LEGEKGLNVI ELAEKIQKSG  720
LRDLTTSKTP EASISVALSR DPVLFERIAP STYCVRPAFR KDPANAEEII SVAREKIQRY  780
VNGFLAGQNA DDEERDDDSE CDAADGQEID DIGTPSDVIK NTDLQNDVGT CSVNGKDNPS  840
VEVDKKNGFD TVGIGGSNPG QEGGEIDESQ SGEPWVQGLT EGEYSNLCVE ERLNALVAVI  900
GIANEGNTIR AILEDRLDAA TALKKQMWAE AQLDRRRMKE ENIIKFHDSS FGAAAEGSHS  960
PFTLPDNKVH EPAQAAVVND ASVGLDNAQN QLELLPAEKS LAPQDFSTSS FISSIQPSGY  1020
TAERSRMQLK SFIGHKAEEM YVYRSLPLGQ DRRRNRYWLF VASGSSHDPG SGRIFVESPA  1080
GFWRLIDTEE AFDALLTSLD TRGLRESHLH IMMKKIEIPF RERVRRNTLQ NGSVVQCGNA  1140
SRNEAAEASS GGDSPSSMVC STSSDRWEPS FKIELGKNEE GKRNALRRYQ DFQIWMWKEH  1200
FGSSVLCALA HGQKRCLPLL GVCDRCLDTF LFEEDFCSSC HRTFANVDFV VKLLESEIGY  1260
GDIIQFDSEN VVISSTSCPL RILLIKALLS MLEVSIPREA LQSSWTEDTR RIWGLNLHNS  1320
SSTEDLLQIL TQLEGFVKQD YLSSNFETTK ELLRHYAASS RAPACQYVSQ LPWIPLTTAA  1380
VALRLFEFDA SVSYDPEPKA EPCNGLKVES FPKSPMGYAS INDIQKGEST ALDRGVHRKE  1440
ENWNYLGTTP GSSRGKQMAR GRGGGRPRGR LPKGSARSAS ESTTPVPRRG EMLTQALMQQ  1500
GETQVQKHMR GRRTVRRRRE TNLVIDDIHH DYLGDENNHR SVAESPESPR GRDDLMDINM  1560
ERTPAGNDNN SNSGEAMESD DSAQENPYEF GKWDPHFNAS NRSNELMEMS DEDADNTSND  1620
EEEEEDDDDG YRDEDGRNLE SGGDLDMEDN GEDELDRNGD DDQGSESDAS GDYSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	74	81	RRLKDKKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein