PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019175743.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 453aa MW: 50531.1 Da PI: 6.6032

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019175743.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	113.5	2.2e-35	40	183	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.......lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.... 79 lp+G++F+Ptd+el+ e+L++kv +++ + + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ XP_019175743.1 40 LPAGVKFDPTDQELI-EHLEAKVLARDqskshplI---DefipTIEGEdGICYTHPEKLP-GVTRDGLNRHFFHRPSKAYTTGTRKRRKIQtecd 129 799**********.999998855554443...144334766646******.555667799**************7333455 PP NAM 80 ....sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_019175743.1 130 lqggETRWHKTGKTRPVMV-HGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 183 5544778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MNKSGSDLID AKLEEHQLCG SKHCPECGHK LEGKPDWVGL PAGVKFDPTD QELIEHLEAK 60 VLARDQSKSH PLIDEFIPTI EGEDGICYTH PEKLPGVTRD GLNRHFFHRP SKAYTTGTRK 120 RRKIQTECDL QGGETRWHKT GKTRPVMVHG KQKGCKKILV LYTNFGKNRK PEKTNWVMHQ 180 YHLGQHEEEK EGELVVSKIF YQTQPRQCNW SSERSTAGAA AVGGGAGEAS SEPTSCSSSK 240 EINVGSSHRD ELSAAVVGAA MSSYTAMDIQ QLKADHFGFL PFRKNFDEAG IGGGEGSRAM 300 EGAAAAVAEH GGACEERDIS DQHQSHAYHV THDPPQHHQH HHHHHQIAAT QFHIISPPPL 360 HHASVNILDH NIDPFQVPRM LLPNDNFQCF WQQAQQQQQQ QEGGRSTSGL EELIMGCTST 420 DMKEETSIPN PQEAEWIKYS SFWPDPDNPD HHG

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MNKSGSDLID AKLEEHQLCG SKHCPECGHK LEGKPDWVGL PAGVKFDPTD QELIEHLEAK  60
VLARDQSKSH PLIDEFIPTI EGEDGICYTH PEKLPGVTRD GLNRHFFHRP SKAYTTGTRK  120
RRKIQTECDL QGGETRWHKT GKTRPVMVHG KQKGCKKILV LYTNFGKNRK PEKTNWVMHQ  180
YHLGQHEEEK EGELVVSKIF YQTQPRQCNW SSERSTAGAA AVGGGAGEAS SEPTSCSSSK  240
EINVGSSHRD ELSAAVVGAA MSSYTAMDIQ QLKADHFGFL PFRKNFDEAG IGGGEGSRAM  300
EGAAAAVAEH GGACEERDIS DQHQSHAYHV THDPPQHHQH HHHHHQIAAT QFHIISPPPL  360
HHASVNILDH NIDPFQVPRM LLPNDNFQCF WQQAQQQQQQ QEGGRSTSGL EELIMGCTST  420
DMKEETSIPN PQEAEWIKYS SFWPDPDNPD HHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-140	NAC family protein