PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019175555.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 795aa MW: 87244.3 Da PI: 7.0744

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019175555.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.3	2.9e-09	602	634	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ +++ LA+++gLt +qV++WF N R + XP_019175555.1 602 HPYPTDTDKHMLASQTGLTRNQVSNWFINARVR 634 89*****************************87 PP
2	BELL	98.5	5.3e-32	453	519	6	72
BELL 6 qkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 + k+kLl +++eV++rY+qy++q+q+v+ssFe vagl +a+pY+s+Alka+Sr+Frc k i++q+ XP_019175555.1 453 LQNKVKLLYMQDEVCRRYRQYHQQMQMVVSSFESVAGLSAATPYISVALKAVSRQFRCFKSTISNQL 519 5679************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 795 aa Download sequence
MEMRNHGSEF HVVQQSRRDK LRNQNTSSTP SQHMGDYRAN LEQLSLHNVD LVHLPGWRYG 60 NHISCDNSSS SDMLNFGSNP HSVVLNKDNN NNASFPSLGE AVKGSGDPQN CGTWKSCNVD 120 HSQKIGSVWS GVANYSSGSA GIAGNLSPMF VGENLSGCLR LNNDVPVSGI DVKSSYFGYQ 180 ELTNPSSDTC GQFKDLQTLQ EVVASAAVGT RELEMLQNAR GTERSSWLLP GEEDETRLLP 240 TYVDQSSQLF VNTNAASLVN SAVQWNGELE RDNRAIENEA SNTQALSLSL SSVGERIGSS 300 MPDLKPLKSD HLCSYPKQGS KALGNAARQD MIGNLTFTHR DLVPLGPFTG YATILKSSRF 360 LRPAQQLLYE FCNLTTGDKA LNLSEVSGNN VMDHEVGICS EGVNATPRSG GGSLAVDSGA 420 SSSTFYSSNE KSSHEFRGIV SSSNESYHRP EYLQNKVKLL YMQDEVCRRY RQYHQQMQMV 480 VSSFESVAGL SAATPYISVA LKAVSRQFRC FKSTISNQLR SIRKALGEDV LSPTAGASSS 540 KRDAAGTPSG LNFIDQTLQN QNGSGERLHY LEPQTHVWRP QRGLPERAVA ILRAWLFDHF 600 LHPYPTDTDK HMLASQTGLT RNQVSNWFIN ARVRVWKPMV EEIHMLETKA MVEKGSNVGK 660 ADGELGTQGA SQQHLNRRLS LLNERQLLNA RGMSDMAAAE ECPPGISPSS AATIIREKSY 720 QDKRSRIDCG LPVGAMDRPL MGFMPYQQNS LEIGGLGAVS LTLGLRQSIE GAQQQQQQQQ 780 QMQQFGGQII RDFAG

Sequence ? help Back to Top

Protein Sequence Length: 795 aa Download sequence

MEMRNHGSEF HVVQQSRRDK LRNQNTSSTP SQHMGDYRAN LEQLSLHNVD LVHLPGWRYG  60
NHISCDNSSS SDMLNFGSNP HSVVLNKDNN NNASFPSLGE AVKGSGDPQN CGTWKSCNVD  120
HSQKIGSVWS GVANYSSGSA GIAGNLSPMF VGENLSGCLR LNNDVPVSGI DVKSSYFGYQ  180
ELTNPSSDTC GQFKDLQTLQ EVVASAAVGT RELEMLQNAR GTERSSWLLP GEEDETRLLP  240
TYVDQSSQLF VNTNAASLVN SAVQWNGELE RDNRAIENEA SNTQALSLSL SSVGERIGSS  300
MPDLKPLKSD HLCSYPKQGS KALGNAARQD MIGNLTFTHR DLVPLGPFTG YATILKSSRF  360
LRPAQQLLYE FCNLTTGDKA LNLSEVSGNN VMDHEVGICS EGVNATPRSG GGSLAVDSGA  420
SSSTFYSSNE KSSHEFRGIV SSSNESYHRP EYLQNKVKLL YMQDEVCRRY RQYHQQMQMV  480
VSSFESVAGL SAATPYISVA LKAVSRQFRC FKSTISNQLR SIRKALGEDV LSPTAGASSS  540
KRDAAGTPSG LNFIDQTLQN QNGSGERLHY LEPQTHVWRP QRGLPERAVA ILRAWLFDHF  600
LHPYPTDTDK HMLASQTGLT RNQVSNWFIN ARVRVWKPMV EEIHMLETKA MVEKGSNVGK  660
ADGELGTQGA SQQHLNRRLS LLNERQLLNA RGMSDMAAAE ECPPGISPSS AATIIREKSY  720
QDKRSRIDCG LPVGAMDRPL MGFMPYQQNS LEIGGLGAVS LTLGLRQSIE GAQQQQQQQQ  780
QMQQFGGQII RDFAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	2e-71	TALE family protein