PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019175553.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 807aa MW: 88419.7 Da PI: 7.0706

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019175553.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.3	3e-09	614	646	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ +++ LA+++gLt +qV++WF N R + XP_019175553.1 614 HPYPTDTDKHMLASQTGLTRNQVSNWFINARVR 646 89*****************************87 PP
2	BELL	98.5	5.4e-32	465	531	6	72
BELL 6 qkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 + k+kLl +++eV++rY+qy++q+q+v+ssFe vagl +a+pY+s+Alka+Sr+Frc k i++q+ XP_019175553.1 465 LQNKVKLLYMQDEVCRRYRQYHQQMQMVVSSFESVAGLSAATPYISVALKAVSRQFRCFKSTISNQL 531 5679************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 807 aa Download sequence
MEGINVVKSC GGMEMRNHGS EFHVVQQSRR DKLRNQNTSS TPSQHMGDYR ANLEQLSLHN 60 VDLVHLPGWR YGNHISCDNS SSSDMLNFGS NPHSVVLNKD NNNNASFPSL GEAVKGSGDP 120 QNCGTWKSCN VDHSQKIGSV WSGVANYSSG SAGIAGNLSP MFVGENLSGC LRLNNDVPVS 180 GIDVKSSYFG YQELTNPSSD TCGQFKDLQT LQEVVASAAV GTRELEMLQN ARGTERSSWL 240 LPGEEDETRL LPTYVDQSSQ LFVNTNAASL VNSAVQWNGE LERDNRAIEN EASNTQALSL 300 SLSSVGERIG SSMPDLKPLK SDHLCSYPKQ GSKALGNAAR QDMIGNLTFT HRDLVPLGPF 360 TGYATILKSS RFLRPAQQLL YEFCNLTTGD KALNLSEVSG NNVMDHEVGI CSEGVNATPR 420 SGGGSLAVDS GASSSTFYSS NEKSSHEFRG IVSSSNESYH RPEYLQNKVK LLYMQDEVCR 480 RYRQYHQQMQ MVVSSFESVA GLSAATPYIS VALKAVSRQF RCFKSTISNQ LRSIRKALGE 540 DVLSPTAGAS SSKRDAAGTP SGLNFIDQTL QNQNGSGERL HYLEPQTHVW RPQRGLPERA 600 VAILRAWLFD HFLHPYPTDT DKHMLASQTG LTRNQVSNWF INARVRVWKP MVEEIHMLET 660 KAMVEKGSNV GKADGELGTQ GASQQHLNRR LSLLNERQLL NARGMSDMAA AEECPPGISP 720 SSAATIIREK SYQDKRSRID CGLPVGAMDR PLMGFMPYQQ NSLEIGGLGA VSLTLGLRQS 780 IEGAQQQQQQ QQQMQQFGGQ IIRDFAG

Sequence ? help Back to Top

Protein Sequence Length: 807 aa Download sequence

MEGINVVKSC GGMEMRNHGS EFHVVQQSRR DKLRNQNTSS TPSQHMGDYR ANLEQLSLHN  60
VDLVHLPGWR YGNHISCDNS SSSDMLNFGS NPHSVVLNKD NNNNASFPSL GEAVKGSGDP  120
QNCGTWKSCN VDHSQKIGSV WSGVANYSSG SAGIAGNLSP MFVGENLSGC LRLNNDVPVS  180
GIDVKSSYFG YQELTNPSSD TCGQFKDLQT LQEVVASAAV GTRELEMLQN ARGTERSSWL  240
LPGEEDETRL LPTYVDQSSQ LFVNTNAASL VNSAVQWNGE LERDNRAIEN EASNTQALSL  300
SLSSVGERIG SSMPDLKPLK SDHLCSYPKQ GSKALGNAAR QDMIGNLTFT HRDLVPLGPF  360
TGYATILKSS RFLRPAQQLL YEFCNLTTGD KALNLSEVSG NNVMDHEVGI CSEGVNATPR  420
SGGGSLAVDS GASSSTFYSS NEKSSHEFRG IVSSSNESYH RPEYLQNKVK LLYMQDEVCR  480
RYRQYHQQMQ MVVSSFESVA GLSAATPYIS VALKAVSRQF RCFKSTISNQ LRSIRKALGE  540
DVLSPTAGAS SSKRDAAGTP SGLNFIDQTL QNQNGSGERL HYLEPQTHVW RPQRGLPERA  600
VAILRAWLFD HFLHPYPTDT DKHMLASQTG LTRNQVSNWF INARVRVWKP MVEEIHMLET  660
KAMVEKGSNV GKADGELGTQ GASQQHLNRR LSLLNERQLL NARGMSDMAA AEECPPGISP  720
SSAATIIREK SYQDKRSRID CGLPVGAMDR PLMGFMPYQQ NSLEIGGLGA VSLTLGLRQS  780
IEGAQQQQQQ QQQMQQFGGQ IIRDFAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	2e-71	TALE family protein