PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019174847.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | GATA | ||||||||
Protein Properties | Length: 353aa MW: 38815.4 Da PI: 6.1406 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 49 | 8.3e-16 | 205 | 241 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+++ Tp +Rrgpdg++tLCnaCGl+++ kg+ XP_019174847.1 205 CHHCGVSEncTPAMRRGPDGPRTLCNACGLKWANKGT 241 **********************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 353 aa Download sequence |
MAANPRPLQA IPVRDHAPPA VSLDDVDDDN GTYEDDDTMD EEEYSRVNSK NHRGGSLTER 60 LKGGVVVAPS RTSELTLAFE GEVYVFPAVT PEKVQAVLLL LGGPDIPTAV PSVDVPLNSK 120 VEDDMPKHPN LSRRIASLVR FREKRKERCY DKKIRYTVRK EVAQRMHRKN GQFASLKGGG 180 SSNWDPSNCV LEDGTPQSET VPRRCHHCGV SENCTPAMRR GPDGPRTLCN ACGLKWANKG 240 TLRDLSKGGR IISLEHRELD TPTDIKPSVL QNESFPHNQD ELGTPGDPLK TATLGTQVHS 300 DNHNENLPGN CKDLANKIPD VIVRSPGHID VQETLVDFGN GSKTEIDIPA NFE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.2 | 8e-62 | GATA family protein |