PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019174749.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 682aa MW: 75092.8 Da PI: 7.2797

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019174749.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.3	1.5e-09	480	517	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps++++ L++++gL+++qV++WF N R + XP_019174749.1 480 FEHflHPYPSEADKHLLSRQTGLSKNQVSNWFINARVR 517 554459******************************88 PP
2	BELL	107.7	7e-35	340	411	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +r e q++k kLls+l+eVd rY +y++q+q+++ sF++v g+g+a+pYt+lA+ka+SrhFrc+kdai+ q+ XP_019174749.1 340 DRSEYQRRKIKLLSMLDEVDGRYARYCDQMQAMVTSFDTVLGYGAAAPYTTLAQKAMSRHFRCIKDAIMVQL 411 5899****************************************************************9996 PP

Sequence ? help Back to Top
Protein Sequence Length: 682 aa Download sequence
MSQGYPHHHQ EFYSSQNDYQ RSAAAAAAAA ASSMRIHQQG FETPPPPIPL QVEEPPPTYD 60 SGGGILAEMI NYPPEWRKAA TEILDDQIQS SFRSSWPRQK EQHLSVNEAL PFMNLHIKAS 120 SPPPPRPSSS ALHMLNNPNS GAGSDLSHHG YHHMLSPLSM EAAAPPSQFT WIPGSSSGAV 180 VENDSAKIRS IIEAQGLSLS LSSSLRNMEA AKLEELRIGN GAINYLHNQG LLEANNAANY 240 HPHPHPHQQL LHSGLAMDLP PNTQVHVGYA ATNVLRGSRY LKAAQELLEE FCCVGRGHFK 300 NQRAKKNESG NPNSIAAESG NSPAGSSSSK EQPPPLSAAD RSEYQRRKIK LLSMLDEVDG 360 RYARYCDQMQ AMVTSFDTVL GYGAAAPYTT LAQKAMSRHF RCIKDAIMVQ LKETYRLLGE 420 KDPTGSSGLT KGETPRLRVL DQKLRQQKAL NQMGMMDSEA WRPQRGLPER SVSVLRAWLF 480 EHFLHPYPSE ADKHLLSRQT GLSKNQVSNW FINARVRLWK PMVEEMYQQE SKEEEAEEQE 540 NAAAQSPTPD DSGNKGITAT ATTTTTTMPS PGGRRSEFIA TENDPSRSYA IVNYSSSSSS 600 RPHQHHHQYA STTVPHLPDT ASATSPRWEP PGMHGWGMVV DGDVRLGAAA QSTGDVSLTL 660 GLRHSENVPR NTRLSIRDFG AF

Sequence ? help Back to Top

Protein Sequence Length: 682 aa Download sequence

MSQGYPHHHQ EFYSSQNDYQ RSAAAAAAAA ASSMRIHQQG FETPPPPIPL QVEEPPPTYD  60
SGGGILAEMI NYPPEWRKAA TEILDDQIQS SFRSSWPRQK EQHLSVNEAL PFMNLHIKAS  120
SPPPPRPSSS ALHMLNNPNS GAGSDLSHHG YHHMLSPLSM EAAAPPSQFT WIPGSSSGAV  180
VENDSAKIRS IIEAQGLSLS LSSSLRNMEA AKLEELRIGN GAINYLHNQG LLEANNAANY  240
HPHPHPHQQL LHSGLAMDLP PNTQVHVGYA ATNVLRGSRY LKAAQELLEE FCCVGRGHFK  300
NQRAKKNESG NPNSIAAESG NSPAGSSSSK EQPPPLSAAD RSEYQRRKIK LLSMLDEVDG  360
RYARYCDQMQ AMVTSFDTVL GYGAAAPYTT LAQKAMSRHF RCIKDAIMVQ LKETYRLLGE  420
KDPTGSSGLT KGETPRLRVL DQKLRQQKAL NQMGMMDSEA WRPQRGLPER SVSVLRAWLF  480
EHFLHPYPSE ADKHLLSRQT GLSKNQVSNW FINARVRLWK PMVEEMYQQE SKEEEAEEQE  540
NAAAQSPTPD DSGNKGITAT ATTTTTTMPS PGGRRSEFIA TENDPSRSYA IVNYSSSSSS  600
RPHQHHHQYA STTVPHLPDT ASATSPRWEP PGMHGWGMVV DGDVRLGAAA QSTGDVSLTL  660
GLRHSENVPR NTRLSIRDFG AF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23760.2	1e-121	TALE family protein