PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019174669.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 331aa MW: 37019.1 Da PI: 9.8214 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 381.7 | 1.2e-116 | 1 | 331 | 1 | 301 |
GAGA_bind 1 mdddgsre.rnkg.yye....pa.aslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllve 88 mdd ++ r+k + ++ +++ +q+m ++aerda+i+ernlalsekkaa+aerd a lqrd+a+aern+a++erdn++++l+++e XP_019174669.1 1 MDDGHRENgRHKLpQ-GqwlmQHqPTM-----KQIMGIMAERDAAIQERNLALSEKKAALAERDTAILQRDTAIAERNNAIMERDNAIATLQYHE 89 555544345554311.11222222444.....5************************************************************** PP GAGA_bind 89 nsla....salpvgvqvlsgtksidslqq..lsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177 s++ s +p+g+q+++g+k++++ qq +++p++ + a++ r++++++++p++ aa+e + +++k+ ++ak + ++k k++k+ kk XP_019174669.1 90 SSMNtgsmSPCPPGCQISRGVKHMHHPQQhvQHQPHMVEAAYNSRDMHMSDTMPMSPAAPEPAKPRRNKRAKEAKPATSSK------KTSKPSKK 178 *999999899******************9744559*******************998888777666666444443332222......23333344 PP GAGA_bind 178 vkkesader.............................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyP 243 vkke++d + sk ++k++dl+ln+v++Dest+PvPvCsCtG+lr CYkWGnGGWqS+CCtt++S+yP XP_019174669.1 179 VKKEGEDLNktmfgksqewkgtqemgsgsdelsrqmcvSKPDWKDQDLGLNQVAFDESTMPVPVCSCTGVLRPCYKWGNGGWQSSCCTTNLSMYP 273 4444444222445555678899************************************************************************* PP GAGA_bind 244 LPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 LP+++++r+aRi+grKmS++af+klL++LaaeG+dlsnpvDLk+hWAkHGtn+++ti+ XP_019174669.1 274 LPTVPNKRHARIGGRKMSGSAFTKLLSRLAAEGHDLSNPVDLKEHWAKHGTNRYITIK 331 *********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence |
MDDGHRENGR HKLPQGQWLM QHQPTMKQIM GIMAERDAAI QERNLALSEK KAALAERDTA 60 ILQRDTAIAE RNNAIMERDN AIATLQYHES SMNTGSMSPC PPGCQISRGV KHMHHPQQHV 120 QHQPHMVEAA YNSRDMHMSD TMPMSPAAPE PAKPRRNKRA KEAKPATSSK KTSKPSKKVK 180 KEGEDLNKTM FGKSQEWKGT QEMGSGSDEL SRQMCVSKPD WKDQDLGLNQ VAFDESTMPV 240 PVCSCTGVLR PCYKWGNGGW QSSCCTTNLS MYPLPTVPNK RHARIGGRKM SGSAFTKLLS 300 RLAAEGHDLS NPVDLKEHWA KHGTNRYITI K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42520.1 | 1e-134 | BBR-BPC family protein |