PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019174542.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 390aa MW: 43042.8 Da PI: 7.1607

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019174542.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.3	1.4e-09	317	354	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 F+ ++yp+ +e+ LA+++gLt++qV++WF N R + XP_019174542.1 317 FQHflHPYPNDSEKLILASQTGLTKNQVSNWFINARVR 354 665569******************************88 PP
2	BELL	93.5	1.9e-30	187	258	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e++el+ ++ L+ lle V++rY+qy++ ++ ++ssFea+aglg+ k+Yt lAl+a+S+hF +L++ai++qi XP_019174542.1 187 EKHELHTRIMALIALLEGVERRYEQYHDRMEELVSSFEAIAGLGAGKSYTGLALQAMSKHFCSLREAIVSQI 258 689********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MVSQNSNTEP PSIPHQFITP YAMTSQPQVW NQNCADLGTT IHSLGERMSR AVDLLVHSPQ 60 ATHTRNVMDL LGSHQKLSLS LGMVNPGFVN PGMGCFSSDY SVAGTGTGTA SSSSSTSIST 120 FSGPESFAAI IANSKYLRPT QSLLEEVVSV GGKATDSEKY IRRLSPSGKK GSLGFRSMVN 180 AELPSNEKHE LHTRIMALIA LLEGVERRYE QYHDRMEELV SSFEAIAGLG AGKSYTGLAL 240 QAMSKHFCSL REAIVSQINS LLQKLSEELP TMMINRDAGL HKMFLQQLGM IQSSRQSWRP 300 IRGLPETSVA TLRAWLFQHF LHPYPNDSEK LILASQTGLT KNQVSNWFIN ARVRLWKPMI 360 EEMYRDEFAE SDPLLATSAT RQSVADSAEE

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MVSQNSNTEP PSIPHQFITP YAMTSQPQVW NQNCADLGTT IHSLGERMSR AVDLLVHSPQ  60
ATHTRNVMDL LGSHQKLSLS LGMVNPGFVN PGMGCFSSDY SVAGTGTGTA SSSSSTSIST  120
FSGPESFAAI IANSKYLRPT QSLLEEVVSV GGKATDSEKY IRRLSPSGKK GSLGFRSMVN  180
AELPSNEKHE LHTRIMALIA LLEGVERRYE QYHDRMEELV SSFEAIAGLG AGKSYTGLAL  240
QAMSKHFCSL REAIVSQINS LLQKLSEELP TMMINRDAGL HKMFLQQLGM IQSSRQSWRP  300
IRGLPETSVA TLRAWLFQHF LHPYPNDSEK LILASQTGLT KNQVSNWFIN ARVRLWKPMI  360
EEMYRDEFAE SDPLLATSAT RQSVADSAEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75430.1	2e-90	TALE family protein