PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019174541.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 514aa MW: 57461.4 Da PI: 5.9714

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019174541.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.7	1.1e-09	404	441	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gLt +qV +WF N R + XP_019174541.1 404 FEHflHPYPKDSEKVTLARQTGLTRSQVANWFINARVR 441 664459******************************88 PP
2	BELL	99.8	2.1e-32	271	341	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 + +l++k +kL sll++Vd Ykqy+e +q+++ssFe+vaglg+a+pYtslAlk+iS +FrcL dai++qi XP_019174541.1 271 QYDLESKMTKLFSLLDKVDMSYKQYYEHMQVLVSSFEMVAGLGAARPYTSLALKTISCQFRCLCDAIKKQI 341 56899*****************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MATYYSGLTN QRDALPLLPD QKHTSFQSGV PGGVMFLNHP YPELSPNNNA EVQSIRSGDE 60 MLLLSPTSDL LNMQQPVGSL LNGGSGSMEA NAFSSKPFDM QNVQYQGLSL SLAMEVPSSV 120 QVPSYHDQYR NSGFSSLLTS HAQGSHQYNE DKNVEYLSFD LAGDHHQNGV KVGAMDNLES 180 SIGLREVNFS AHLHEATAGA SASIYNSKYL KAAQDLLDEV VNVQSAKKQA DKQNHFSFLK 240 NGSEETEVKS SCSVPGMASD MISAELSATE QYDLESKMTK LFSLLDKVDM SYKQYYEHMQ 300 VLVSSFEMVA GLGAARPYTS LALKTISCQF RCLCDAIKKQ IQITRQSLGE QGNSQGERLY 360 RLRHVDHQMR QQRLLQQFGV MRQPWRPLRG LPENAVSILR AWLFEHFLHP YPKDSEKVTL 420 ARQTGLTRSQ VANWFINARV RLWKPMIEEM YKEEVRDAEA GSTASPEQIR AAASEETADK 480 ELQESLTGDY SCIQQYSDVR TNNVPDHLLD ASRS

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MATYYSGLTN QRDALPLLPD QKHTSFQSGV PGGVMFLNHP YPELSPNNNA EVQSIRSGDE  60
MLLLSPTSDL LNMQQPVGSL LNGGSGSMEA NAFSSKPFDM QNVQYQGLSL SLAMEVPSSV  120
QVPSYHDQYR NSGFSSLLTS HAQGSHQYNE DKNVEYLSFD LAGDHHQNGV KVGAMDNLES  180
SIGLREVNFS AHLHEATAGA SASIYNSKYL KAAQDLLDEV VNVQSAKKQA DKQNHFSFLK  240
NGSEETEVKS SCSVPGMASD MISAELSATE QYDLESKMTK LFSLLDKVDM SYKQYYEHMQ  300
VLVSSFEMVA GLGAARPYTS LALKTISCQF RCLCDAIKKQ IQITRQSLGE QGNSQGERLY  360
RLRHVDHQMR QQRLLQQFGV MRQPWRPLRG LPENAVSILR AWLFEHFLHP YPKDSEKVTL  420
ARQTGLTRSQ VANWFINARV RLWKPMIEEM YKEEVRDAEA GSTASPEQIR AAASEETADK  480
ELQESLTGDY SCIQQYSDVR TNNVPDHLLD ASRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16400.1	1e-102	TALE family protein