PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019174118.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 434aa    MW: 46049.1 Da    PI: 8.1456
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019174118.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.66.1e-053173551255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  XP_019174118.1 317 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 355
                     7788899*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    
MESAHLHNHH LHHQHHQQSF QDSPPPPPSS SSPSSSYGVS TSSTAQYSWT PNTTLLSGGA  60
GGGGLSSLYA NGVAAAGSIL SSRNHHHQVS VCNAPMAQDL SFHHWANAAA AGFGGGGGGS  120
GQTIKQELSS PDCYPRLADN MNTLDAKLLL GTLSGGGHQP AAAAHQFYCS STASSNTNTN  180
TNRGRFSQIY PTISVPSLNQ EASSSLANSS SLGMNLQALD LFNSATINGG FVHTSPDDHQ  240
HLGFHNFASF DHHHLQQSSQ RPFPSNVSSP SLFSHATVAI SADPKRPCNL VEPNPPQAPP  300
KKSRLDSRAS CPPFKVRKEK LGDRIAALQQ LVAPFGKTDT ASVLMEAIGY IKFLQNQVET  360
LSVPYMKLSR NKNSGRAMQG GQEEIINIGS EEARRGLRSR GLCLVPLSCL SYVTDSGGGV  420
WPPPPSLEHF SPIQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.13e-53bHLH family protein