PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019174108.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | GATA | ||||||||
Protein Properties | Length: 244aa MW: 26845.2 Da PI: 8.6269 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 55 | 1.1e-17 | 188 | 225 | 1 | 36 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkglk 36 C++C+t++ Tp++Rrgp g++tLCnaCGl+++ kg++ XP_019174108.1 188 CTHCNTSSkaTPMMRRGPAGPRTLCNACGLFWANKGTM 225 ***********************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MQPTSAPGHF PGGGDCAAGK EEHTNNAGIG YEVQCIEGGA IGGFDGVEVP VPYGSVFTAA 60 DAAYAPDQLT LSFRGQVYVF DAVTLEKVQS VLLLLGGYEY TPGAFTTQRE NTDYSARCSD 120 PKRAESLNRF RQKRKERCYG RKIRYNIRHE VAVRMQRRKG QFASKNTIAG NAQMESGQDD 180 NSHQEIWCTH CNTSSKATPM MRRGPAGPRT LCNACGLFWA NKGTMRVLPK RRCSNTLTEM 240 EDVG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24470.3 | 6e-67 | GATA family protein |