PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019174105.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | GATA | ||||||||
Protein Properties | Length: 286aa MW: 31459 Da PI: 6.9647 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 54.6 | 1.4e-17 | 188 | 225 | 1 | 36 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkglk 36 C++C+t++ Tp++Rrgp g++tLCnaCGl+++ kg++ XP_019174105.1 188 CTHCNTSSkaTPMMRRGPAGPRTLCNACGLFWANKGTM 225 ***********************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 286 aa Download sequence |
MQPTSAPGHF PGGGDCAAGK EEHTNNAGIG YEVQCIEGGA IGGFDGVEVP VPYGSVFTAA 60 DAAYAPDQLT LSFRGQVYVF DAVTLEKVQS VLLLLGGYEY TPGAFTTQRE NTDYSARCSD 120 PKRAESLNRF RQKRKERCYG RKIRYNIRHE VAVRMQRRKG QFASKNTIAG NAQMESGQDD 180 NSHQEIWCTH CNTSSKATPM MRRGPAGPRT LCNACGLFWA NKGTMRVLPK RRCSNTLTEM 240 EDEDEDDSDS DYGMPLPLRY NIDYMASSSA GDSSAVLSPE RGCQRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24470.2 | 9e-66 | GATA family protein |