PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019173043.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 149aa MW: 16669.3 Da PI: 10.8876 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 56.5 | 9.3e-18 | 4 | 63 | 67 | 127 |
NAM 67 kyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 + ++g ++nr t +gyWka g+ + ++s ++e +g k+t++fy+grap+g+kt+W m ey+ XP_019173043.1 4 NISRGGKPNRLTPEGYWKAAGTPTLIYS-NNEIIGGKRTMIFYRGRAPTGRKTEWKMIEYK 63 4567999*********************.999****************************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 149 aa Download sequence |
MQENISRGGK PNRLTPEGYW KAAGTPTLIY SNNEIIGGKR TMIFYRGRAP TGRKTEWKMI 60 EYKAILGQPP PTATMSDVQL RHEFIRRRGL TADSTGRPYV RPSCHCCPSS CRAAISTPAN 120 CTRNHSGAVI FLPSAGCPRI RRRFIIFAE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G44350.2 | 3e-23 | NAC family protein |