PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019172970.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 194aa MW: 22107 Da PI: 9.4413 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.3 | 4e-28 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++nrqvtfskRrng+lKKA+EL +LCdaev ++ifsstgkl+e++s XP_019172970.1 10 RIDNSTNRQVTFSKRRNGLLKKAKELGILCDAEVGLMIFSSTGKLHEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 59.7 | 1.2e-20 | 79 | 142 | 5 | 69 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 ++ ++ +++ + +q+e+a L+++++n+q+ +R+l+Ge L Ls+keLq+Le+qLe sl+ iR kK XP_019172970.1 79 QSPQNPASELKFWQTEAAILRQQLHNMQEDHRKLMGE-LYGLSVKELQNLENQLEMSLRGIRMKK 142 4444788999**************************8.9*************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MGRGKVVIRR IDNSTNRQVT FSKRRNGLLK KAKELGILCD AEVGLMIFSS TGKLHEFAST 60 SSMRSVIERY NKTQDESLQS PQNPASELKF WQTEAAILRQ QLHNMQEDHR KLMGELYGLS 120 VKELQNLENQ LEMSLRGIRM KKVYGTRDPN TVNGDTISPY DFTISEESHA HIHLQLSQPQ 180 PQNFSDRATA LDST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57230.1 | 2e-71 | MIKC_MADS family protein |