PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019172029.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 478aa MW: 52107.8 Da PI: 8.0691

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019172029.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.7	4.8e-32	297	350	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_019172029.1 297 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 350 9****************************************************7 PP
2	Myb_DNA-binding	46.3	9.5e-15	298	349	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ XP_019172029.1 298 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 349 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MPLEGVFIEP SSRSNPLPDL SLHISPPNNT ISSSRPSSCI NELVAAAAGF DLPTNHRRHR 60 QTDNNTSTSA AAAVYPELSL ANPTATAAEE NRFLRTGREQ QQQHQTLQTY PQPYHLQTHT 120 FQQNNSNSNN SSCSQMSNIN HGVSLLDVSD GLRPIKGIPV YQNRSFPFLP MDRENKDPSK 180 MCFYPMPPPP PPTASISHSP SPFFNPVVDH LSLLNNPSPS SSSSSAAAAA AAYRRFNGLS 240 SAYQLPHNQY GGVGIGATAA SHHHHHHPHH DAPPSHGMMM RSRFLPKLPA KRSMRAPRMR 300 WTSTLHARFV HAVELLGGHE RATPKSVLEL MDVKDLTLAH VKSHLQMYRT VKTTDKPAAS 360 SGQSDGSGEE DLTVLGSTAA GGGGIRLMDQ RGHPAAAVAD GSSEPDFPNS TTTTLWSNSS 420 SSREAWLQTN SSQESNGLIR SSSFPTQQRC GHPIDDCEKN PSLEFTLGRP DWVQKERD

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MPLEGVFIEP SSRSNPLPDL SLHISPPNNT ISSSRPSSCI NELVAAAAGF DLPTNHRRHR  60
QTDNNTSTSA AAAVYPELSL ANPTATAAEE NRFLRTGREQ QQQHQTLQTY PQPYHLQTHT  120
FQQNNSNSNN SSCSQMSNIN HGVSLLDVSD GLRPIKGIPV YQNRSFPFLP MDRENKDPSK  180
MCFYPMPPPP PPTASISHSP SPFFNPVVDH LSLLNNPSPS SSSSSAAAAA AAYRRFNGLS  240
SAYQLPHNQY GGVGIGATAA SHHHHHHPHH DAPPSHGMMM RSRFLPKLPA KRSMRAPRMR  300
WTSTLHARFV HAVELLGGHE RATPKSVLEL MDVKDLTLAH VKSHLQMYRT VKTTDKPAAS  360
SGQSDGSGEE DLTVLGSTAA GGGGIRLMDQ RGHPAAAVAD GSSEPDFPNS TTTTLWSNSS  420
SSREAWLQTN SSQESNGLIR SSSFPTQQRC GHPIDDCEKN PSLEFTLGRP DWVQKERD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	5e-60	G2-like family protein