PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019171998.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family SBP
Protein Properties Length: 1078aa    MW: 119857 Da    PI: 7.3434
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019171998.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP1253.1e-39153230178
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     +Cqv++C+++l++ak+yhrrhkvCe+hsk +++lv++++qrfCqqCsrfh l efDe+krsCrrrLa+hn+rrrk+q+
  XP_019171998.1 153 MCQVDNCRENLTNAKDYHRRHKVCEIHSKVSKALVRDQMQRFCQQCSRFHLLLEFDEGKRSCRRRLAGHNKRRRKTQP 230
                     6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1078 aa     Download sequence    
MEELSAGVVS PMLIHHQQLG GCLPHSMAKK RSLSFQSINM AQQRNPLDTW NPKAWEWDST  60
RFLAKRKEYD GFQPGARAEL QLRRDGAVPV QPKRREEQMD DPKKTIHVVE DDETLRLNLG  120
GTGGCKLNSA EELTVQPNKR VRSGSPNGGN YPMCQVDNCR ENLTNAKDYH RRHKVCEIHS  180
KVSKALVRDQ MQRFCQQCSR FHLLLEFDEG KRSCRRRLAG HNKRRRKTQP EDTTPRPLLP  240
GNNDNSGNRN LDIVNLLAVL ASEQGNNDPG SANIPLVPDK DQIMEILSKI KSLPLPANLV  300
DKLPASGSSS QTSANQLSPG FKANESISSP STLDLLSPLS ATPAAGSSDA VDIQSQRSSQ  360
GSDTERSTLT CVEKVKWLNL QERPPLELLS VQGDRTSASF QSTDDLDFQV HETRSHLPLQ  420
LFSSQTEDDS PPRLAGCGKY FSSESSNPSA ERSPSSSPHV EHKLFPMQIS NETVKPHCTF  480
ASREETQENK NLNATKKSGC ITSLKLFGGS IAGADIGSIQ NPAYRTGYTS SYGSDHSPSS  540
TNSDARDRTG RIIFKLFDKD PSHLPGTLRT QIYNWLSKIP SEMESYIRPG CIVLSLYLSM  600
PPSVWEQLEE NLFQYANALV KEVDPQFWAS GRFLIRTDKQ LALHKDGNIR VCKLWRERKS  660
PELIYVSPLA VISGQEIYLT LKGRNLNFPG TKINCTHAGG YTIRSVPSSA CQENACEEII  720
LGNFVIDDTD PSLLGRGFIE VENGFGGSTF PVIIADNAVC EELRCLESEI IEIVKVPKAV  780
DFWMPRSREE VVHFLNELGW VFQRKGNSSM FEGPDFMISR FKFLFIFSVE HDFCAVVKTL  840
LEILLEITLV REASRESLEM LFELQLLSRA VKRKCRKMVD LLVHYSICAS GGSPINYIFT  900
PNLTGPGGIT PLHLAACTSN SDDIVDALTS DPQEIGLHCW KSVLDENGVS PCAYASMRNN  960
DSYNKLVSQK LSVREKGKEI CLVIGNEVEE EQEHKPPTAA AACQVNKEPK SCSKCASAAI  1020
MRYNSRPRSP RGLMYRPYIH SLLAIAAVCA CVCIFFRGSP DIGSVAPLKW ENLDFGAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G20980.10.0SBP family protein