PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019171998.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | SBP | ||||||||
Protein Properties | Length: 1078aa MW: 119857 Da PI: 7.3434 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 125 | 3.1e-39 | 153 | 230 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C+++l++ak+yhrrhkvCe+hsk +++lv++++qrfCqqCsrfh l efDe+krsCrrrLa+hn+rrrk+q+ XP_019171998.1 153 MCQVDNCRENLTNAKDYHRRHKVCEIHSKVSKALVRDQMQRFCQQCSRFHLLLEFDEGKRSCRRRLAGHNKRRRKTQP 230 6**************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1078 aa Download sequence |
MEELSAGVVS PMLIHHQQLG GCLPHSMAKK RSLSFQSINM AQQRNPLDTW NPKAWEWDST 60 RFLAKRKEYD GFQPGARAEL QLRRDGAVPV QPKRREEQMD DPKKTIHVVE DDETLRLNLG 120 GTGGCKLNSA EELTVQPNKR VRSGSPNGGN YPMCQVDNCR ENLTNAKDYH RRHKVCEIHS 180 KVSKALVRDQ MQRFCQQCSR FHLLLEFDEG KRSCRRRLAG HNKRRRKTQP EDTTPRPLLP 240 GNNDNSGNRN LDIVNLLAVL ASEQGNNDPG SANIPLVPDK DQIMEILSKI KSLPLPANLV 300 DKLPASGSSS QTSANQLSPG FKANESISSP STLDLLSPLS ATPAAGSSDA VDIQSQRSSQ 360 GSDTERSTLT CVEKVKWLNL QERPPLELLS VQGDRTSASF QSTDDLDFQV HETRSHLPLQ 420 LFSSQTEDDS PPRLAGCGKY FSSESSNPSA ERSPSSSPHV EHKLFPMQIS NETVKPHCTF 480 ASREETQENK NLNATKKSGC ITSLKLFGGS IAGADIGSIQ NPAYRTGYTS SYGSDHSPSS 540 TNSDARDRTG RIIFKLFDKD PSHLPGTLRT QIYNWLSKIP SEMESYIRPG CIVLSLYLSM 600 PPSVWEQLEE NLFQYANALV KEVDPQFWAS GRFLIRTDKQ LALHKDGNIR VCKLWRERKS 660 PELIYVSPLA VISGQEIYLT LKGRNLNFPG TKINCTHAGG YTIRSVPSSA CQENACEEII 720 LGNFVIDDTD PSLLGRGFIE VENGFGGSTF PVIIADNAVC EELRCLESEI IEIVKVPKAV 780 DFWMPRSREE VVHFLNELGW VFQRKGNSSM FEGPDFMISR FKFLFIFSVE HDFCAVVKTL 840 LEILLEITLV REASRESLEM LFELQLLSRA VKRKCRKMVD LLVHYSICAS GGSPINYIFT 900 PNLTGPGGIT PLHLAACTSN SDDIVDALTS DPQEIGLHCW KSVLDENGVS PCAYASMRNN 960 DSYNKLVSQK LSVREKGKEI CLVIGNEVEE EQEHKPPTAA AACQVNKEPK SCSKCASAAI 1020 MRYNSRPRSP RGLMYRPYIH SLLAIAAVCA CVCIFFRGSP DIGSVAPLKW ENLDFGAI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G20980.1 | 0.0 | SBP family protein |