PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019171617.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | G2-like | ||||||||
Protein Properties | Length: 245aa MW: 26899.8 Da PI: 5.6896 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 78.3 | 9.4e-25 | 41 | 94 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr +Wtp+LH+rF+eav+ LGG e AtP+tile+m+ k Ltl+ v+SHLQ +R XP_019171617.1 41 PRFKWTPDLHRRFLEAVQFLGGLECATPRTILEVMDEKELTLNRVRSHLQIHRA 94 89************************************************9996 PP | |||||||
2 | Myb_DNA-binding | 37.5 | 5.3e-12 | 44 | 90 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 +WT++++ ++++av+ lGg t++tI + m k +tl+ ++s++q XP_019171617.1 44 KWTPDLHRRFLEAVQFLGGLecaTPRTILEVMDeKELTLNRVRSHLQ 90 7*****************88**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MAENVFPSSS SSSLSVQGTI EGGQSSSCPE NPTGTRLIYP PRFKWTPDLH RRFLEAVQFL 60 GGLECATPRT ILEVMDEKEL TLNRVRSHLQ IHRANCFDPE QLAIETQAAL AQLAWAASLP 120 YPYGYPPLYS ASPPPPAALY SLPLWPQLPS PPARLYIGPV GPMPPTIPPS MRMMEYSAPA 180 APKTIIFKKL FPKGRPVPID VDETPELMMA GDHINSRPSS SAAREEGQDD DPLDLTLSIR 240 PPSCR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16560.1 | 1e-16 | G2-like family protein |