PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019171615.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 270aa MW: 30231.9 Da PI: 7.5436 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 22.1 | 3.4e-07 | 21 | 42 | 4 | 25 |
G2-like 4 lrWtpeLHerFveaveqLGGse 25 ++W+ +LH+rF ++ve+LGG++ XP_019171615.1 21 IKWSANLHHRFFNVVERLGGKK 42 79******************87 PP | |||||||
2 | G2-like | 78.1 | 1.1e-24 | 66 | 119 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr +Wtp+LH+rF+eav+ LGG e AtP+tile+m+ k Ltl+ v+SHLQ +R XP_019171615.1 66 PRFKWTPDLHRRFLEAVQFLGGLECATPRTILEVMDEKELTLNRVRSHLQIHRA 119 89************************************************9996 PP | |||||||
3 | Myb_DNA-binding | 37.3 | 6.2e-12 | 69 | 115 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 +WT++++ ++++av+ lGg t++tI + m k +tl+ ++s++q XP_019171615.1 69 KWTPDLHRRFLEAVQFLGGLecaTPRTILEVMDeKELTLNRVRSHLQ 115 7*****************88**************************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 270 aa Download sequence |
MEIIIDFMEL FLRNRNTINS IKWSANLHHR FFNVVERLGG KKGTIEGGQS SSCPENPTGT 60 RLIYPPRFKW TPDLHRRFLE AVQFLGGLEC ATPRTILEVM DEKELTLNRV RSHLQIHRAN 120 CFDPEQLAIE TQAALAQLAW AASLPYPYGY PPLYSASPPP PAALYSLPLW PQLPSPPARL 180 YIGPVGPMPP TIPPSMRMME YSAPAAPKTI IFKKLFPKGR PVPIDVDETP ELMMAGDHIN 240 SRPSSSAARE EGQDDDPLDL TLSIRPPSCR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G16560.1 | 2e-16 | G2-like family protein |