PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019171590.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WRKY

Protein Properties

Length: 457aa MW: 49717.3 Da PI: 7.5004

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019171590.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.9	2.8e-30	229	288	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ XP_019171590.1 229 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCIEDMSILITTYEGTHNHP 288 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MNTCNNNNNE SSHHDHMDID LSLKLNESPQ DSPQPVGKSS SSQANKGDSP PSPKNSKTEE 60 EITVLQSEMK RMKEENKVLR EAVEHTMKDF LDLQTKLAIF VHQNDHKKDA SNFLWVNNGE 120 EEKISQEVNR TSSSSSPTAQ LEHDNNNNSF SDTELGLSLT LQTAAADDHE KGRDQKSPAS 180 PPPSIHGNIH HGSSSFAAGL SAKNIPPISQ HNVRKPRVSV RARCESATMN DGCQWRKYGQ 240 KIAKGNPCPR AYYRCTVAPG CPVRKQVQRC IEDMSILITT YEGTHNHPLP VGATAMAAST 300 ASTAAPFMFL DSPNNIGIIP QNQPFLNAPN YHHNIIPTLV RNINPNSAMA ATFHHDPAAS 360 SKLGLVLDLT KDGVSSSASS SSTSLPKLQG QMGQYSSWMM QRLASNFDGG HLQSGNAAEN 420 DKQKLVENVT AIAADPKFRN AVAAAISSFI NKDKPPS

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MNTCNNNNNE SSHHDHMDID LSLKLNESPQ DSPQPVGKSS SSQANKGDSP PSPKNSKTEE  60
EITVLQSEMK RMKEENKVLR EAVEHTMKDF LDLQTKLAIF VHQNDHKKDA SNFLWVNNGE  120
EEKISQEVNR TSSSSSPTAQ LEHDNNNNSF SDTELGLSLT LQTAAADDHE KGRDQKSPAS  180
PPPSIHGNIH HGSSSFAAGL SAKNIPPISQ HNVRKPRVSV RARCESATMN DGCQWRKYGQ  240
KIAKGNPCPR AYYRCTVAPG CPVRKQVQRC IEDMSILITT YEGTHNHPLP VGATAMAAST  300
ASTAAPFMFL DSPNNIGIIP QNQPFLNAPN YHHNIIPTLV RNINPNSAMA ATFHHDPAAS  360
SKLGLVLDLT KDGVSSSASS SSTSLPKLQG QMGQYSSWMM QRLASNFDGG HLQSGNAAEN  420
DKQKLVENVT AIAADPKFRN AVAAAISSFI NKDKPPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	8e-66	WRKY family protein