PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019171350.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 347aa MW: 40198.8 Da PI: 7.0342

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019171350.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	175.2	1.9e-54	7	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv++yL+kkv+ k+++l +vike+d+y++ePwdL++ k+ e+++wyfFs++dkky+tg+r+nratk+g+Wkatg+dk++ XP_019171350.1 7 VPPGFRFHPTDEELVDYYLRKKVALKRIDL-DVIKEIDLYNIEPWDLQElcKIGCeEQSDWYFFSHKDKKYPTGSRTNRATKAGFWKATGRDKAI 100 69**************************.9***********953444442455******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +sk++ l+g++ktLvfykgrap+g k+dW+mheyrl XP_019171350.1 101 YSKHHFLIGMRKTLVFYKGRAPNGLKSDWIMHEYRL 136 ********************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MNSLSHVPPG FRFHPTDEEL VDYYLRKKVA LKRIDLDVIK EIDLYNIEPW DLQELCKIGC 60 EEQSDWYFFS HKDKKYPTGS RTNRATKAGF WKATGRDKAI YSKHHFLIGM RKTLVFYKGR 120 APNGLKSDWI MHEYRLQTNE NGPSQEEGWV VCRAFKKKMP TIARNEGADH ESPLCSSSWY 180 DDQISSFIPD FESPRRISTH HPNYNINIPP PYNINNPHHH HHQLQYNIIV PHEHEQHHHP 240 FIHQSSSLPQ LESPKLPKTL SPCSSMQQQP PAQFHIINSS SSPSLLYCND QSVADHQLTT 300 DWRVLDKFVA SQLMSHEDED NNNNNGDGKE TTDAYSTPLR ASSSFQP

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MNSLSHVPPG FRFHPTDEEL VDYYLRKKVA LKRIDLDVIK EIDLYNIEPW DLQELCKIGC  60
EEQSDWYFFS HKDKKYPTGS RTNRATKAGF WKATGRDKAI YSKHHFLIGM RKTLVFYKGR  120
APNGLKSDWI MHEYRLQTNE NGPSQEEGWV VCRAFKKKMP TIARNEGADH ESPLCSSSWY  180
DDQISSFIPD FESPRRISTH HPNYNINIPP PYNINNPHHH HHQLQYNIIV PHEHEQHHHP  240
FIHQSSSLPQ LESPKLPKTL SPCSSMQQQP PAQFHIINSS SSPSLLYCND QSVADHQLTT  300
DWRVLDKFVA SQLMSHEDED NNNNNGDGKE TTDAYSTPLR ASSSFQP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-108	NAC family protein