PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019171025.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 486aa MW: 52223 Da PI: 7.2369 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 101.3 | 6.4e-32 | 265 | 320 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ XP_019171025.1 265 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 320 68****************************************************97 PP | |||||||
2 | Myb_DNA-binding | 40.3 | 7.4e-13 | 267 | 318 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v+a ++lGg t+k I + m g+t ++ks++qky+ XP_019171025.1 267 RRCWSPDLHRRFVNALQMLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 318 568*****************99*****************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 486 aa Download sequence |
MMASPSELTL DCKPHTYSML LKSFGDHHLH PHHQNDQTLQ KLEDFLSRLE EERLKIDAFK 60 RELPLCMQLL TNAMEASKQQ LQSFRANNNN HGAARPVLEE FIPLKNSSSL EGTTDQKAAA 120 NATGDKANWM TTAQLWSQGN NNNNNNESSM QQKIPSKETE IGFSVSPNPQ MNNNGGAFLP 180 FSKDHRSGSC PSPTLALASP DGKELEEKKS LEINVNLGKC SNNGPATTEL GKSGDCGGGG 240 GGGATLPPPQ DSQTAAATAT QPHRKARRCW SPDLHRRFVN ALQMLGGSQV ATPKQIRELM 300 KVDGLTNDEV KSHLQKYRLH TRRPGPTPQA AAAAAPQLVV LGGIWVPPEY ATAAAAAHGG 360 AAAAAAATLY GAHPTTTHAH HPAPQHFSVG HEFYAAPTPP PPQHLPLHHH AGHPLHHQFH 420 MYKPPPHAQT SPESDGRGTG DRSESIEDGK SESGSWRADS GGEGRALAAL REDGEVSNGS 480 DITLKF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G03500.1 | 7e-97 | G2-like family protein |