PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019170622.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 390aa MW: 43460.1 Da PI: 7.5535

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019170622.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.7	3.9e-52	17	144	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrFhPtdeelv +yLk+kv++k+l++ e ik++diyk++PwdLpk ++ +ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ XP_019170622.1 17 MLPGFRFHPTDEELVGFYLKRKVQHKPLSI-ELIKQLDIYKYDPWDLPKIAAVGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSS 110 579*************************.89***********8777899**********************************98 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lvfykgra +g ktdW+mhe+rl XP_019170622.1 111 eTSKCIGLKKSLVFYKGRAARGIKTDWMMHEFRL 144 66777*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MDGRSSDQTE KIMDEVMLPG FRFHPTDEEL VGFYLKRKVQ HKPLSIELIK QLDIYKYDPW 60 DLPKIAAVGE KEWYFYCPRD RKYRNSARPN RVTGAGFWKA TGTDRPIYSS ETSKCIGLKK 120 SLVFYKGRAA RGIKTDWMMH EFRLPSLSDI STPKRCLDKN IPPNDAWAIC RIFKKANSNA 180 QRALSHSWVV SSPPTTIPQT PTQQTLLTQN TNNLNQVSMP THDFKNSPEI MAVAAVGAAT 240 HPLDLLPYND PSTSYTFPPS LFTHPHHLQP TINDASSLLL DMSNSVFGEF IGKGSDESTV 300 DYGGLINGGG FSAVVPPENA VEGRLQDGVV VGNKESSSNI IDESIRFSFN GFPLNMGAEN 360 AWKLSSLVWE SSPCPSEISS TSYSTTKCYT

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MDGRSSDQTE KIMDEVMLPG FRFHPTDEEL VGFYLKRKVQ HKPLSIELIK QLDIYKYDPW  60
DLPKIAAVGE KEWYFYCPRD RKYRNSARPN RVTGAGFWKA TGTDRPIYSS ETSKCIGLKK  120
SLVFYKGRAA RGIKTDWMMH EFRLPSLSDI STPKRCLDKN IPPNDAWAIC RIFKKANSNA  180
QRALSHSWVV SSPPTTIPQT PTQQTLLTQN TNNLNQVSMP THDFKNSPEI MAVAAVGAAT  240
HPLDLLPYND PSTSYTFPPS LFTHPHHLQP TINDASSLLL DMSNSVFGEF IGKGSDESTV  300
DYGGLINGGG FSAVVPPENA VEGRLQDGVV VGNKESSSNI IDESIRFSFN GFPLNMGAEN  360
AWKLSSLVWE SSPCPSEISS TSYSTTKCYT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	152	156	TPKRC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-105	NAC family protein