PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019170619.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | G2-like | ||||||||
Protein Properties | Length: 250aa MW: 28909.8 Da PI: 9.3542 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 85.1 | 7e-27 | 20 | 71 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wt eLHe+Fv+av+qLG +AtPk+++++m++ gL+l+h+kSHLQkYR XP_019170619.1 20 KPRLKWTAELHEAFVDAVQQLG---EATPKSLMKAMNIRGLSLYHLKSHLQKYRH 71 79*******************4...79***************************6 PP | |||||||
2 | Myb_DNA-binding | 60.7 | 3e-19 | 22 | 70 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e++e +vdav+qlG t+k+ ++ m+ g++l+++ks++qky+ XP_019170619.1 22 RLKWTAELHEAFVDAVQQLGEATPKSLMKAMNiRGLSLYHLKSHLQKYR 70 89**********************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MAPQSVQGNA MSLVLSREAK PRLKWTAELH EAFVDAVQQL GEATPKSLMK AMNIRGLSLY 60 HLKSHLQKYR HGKSHQSRHS CHTRQQGKRA DYSEPRDQRS VAMQTQKNEK LQIDQALQVQ 120 MEVQKKIHEQ IEVQRHLQLR IEAQGKYLQS ALKKAQEILS KADLISLLIS PTMVDLGCQS 180 SSENSELTTM ESCEEREERR YDKRFRGRRY DETLKSSSGF LENLDLNVKS TVNKFDDTDC 240 KVIDLNREWV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69580.1 | 8e-53 | G2-like family protein |