PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019170552.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | FAR1 | ||||||||
Protein Properties | Length: 221aa MW: 24281.2 Da PI: 6.505 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 67.3 | 4e-21 | 67 | 153 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 Yn YA++vGFsvrk +++++ +++i +++f C k g++e+ ++ + ++ r gC a ++ dg w vt+ ++eHnHel++ XP_019170552.1 67 LYNGYAYRVGFSVRKGQQHYKASTKSIQMKRFFCAKAGYKEKPNSG--VKVYSKIDIRAGCGALVQFDGG-DGMWTVTEHVKEHNHELCS 153 7***************************************999887..89999**************999.*****************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MEETADRGED LTGDGLTTIP VNEDFVGDSL STDQADVNID IDGSSLSPVD EDLVGVVVSN 60 SDEACELYNG YAYRVGFSVR KGQQHYKAST KSIQMKRFFC AKAGYKEKPN SGVKVYSKID 120 IRAGCGALVQ FDGGDGMWTV TEHVKEHNHE LCSFGKSHLL RSHRRVLGNN HLEYLKDMKK 180 SGVLANGMRF LKHQSGGSPL VGFTNRDAYN SMACESLKCL N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 3e-15 | FAR1 family protein |