PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019170189.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WRKY

Protein Properties

Length: 572aa MW: 61062.2 Da PI: 8.3657

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019170189.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97	1.2e-30	305	363	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ XP_019170189.1 305 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGTHNHP 363 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 572 aa Download sequence
MDKGWGLTLE NPDRRAGFFT NKPVFGFNLS PRLNPINGGG SGGGAGMVPI NPAAEKRGPP 60 NEVDFFSDKK ADIVVKKEIT LHGEPVTKAD LNVNTGLQLV IANSGSDKST VDDSVSSDME 120 ERRAKNDLSV LQVELEKMNA ENQRLRGMLS QVSTNYTALQ QHLSNLMQHQ NQQSSRIGST 180 QDREVADRKS EEKKPEKEEP TVPRQFLELV PGGGAAAAAQ TDEASQSHTT SEERTLSAGS 240 PRNNNTELSR HKGIIAREDS PDSESWAPNK LPKLNPSKPV DQAAEATMRK ARVSVRARSE 300 APMISDGCQW RKYGQKMAKG NPCPRAYYRC TMAVGCPVRK QVQRCAEDRT ILITTYEGTH 360 NHPLPPAAMA MASTTSAAAN MLLSGAMPSA DGMMNTNFLA RAILPCSSSV ATISASAPFP 420 TVTLDLTQTP NSLPNYQRPP TQFQAPFTGA PQIPQNYPQL PQVFGQGLYN QSKFSGLHVS 480 HQDIAAAAAQ AAQLAQQQQH PAPPPQHPLF ADTLSAATAA ITSDPNFTAA LAAAISSIMG 540 GGSQPNNANN ASNAAAATST SNTNKTSSFP GN

Sequence ? help Back to Top

Protein Sequence Length: 572 aa Download sequence

MDKGWGLTLE NPDRRAGFFT NKPVFGFNLS PRLNPINGGG SGGGAGMVPI NPAAEKRGPP  60
NEVDFFSDKK ADIVVKKEIT LHGEPVTKAD LNVNTGLQLV IANSGSDKST VDDSVSSDME  120
ERRAKNDLSV LQVELEKMNA ENQRLRGMLS QVSTNYTALQ QHLSNLMQHQ NQQSSRIGST  180
QDREVADRKS EEKKPEKEEP TVPRQFLELV PGGGAAAAAQ TDEASQSHTT SEERTLSAGS  240
PRNNNTELSR HKGIIAREDS PDSESWAPNK LPKLNPSKPV DQAAEATMRK ARVSVRARSE  300
APMISDGCQW RKYGQKMAKG NPCPRAYYRC TMAVGCPVRK QVQRCAEDRT ILITTYEGTH  360
NHPLPPAAMA MASTTSAAAN MLLSGAMPSA DGMMNTNFLA RAILPCSSSV ATISASAPFP  420
TVTLDLTQTP NSLPNYQRPP TQFQAPFTGA PQIPQNYPQL PQVFGQGLYN QSKFSGLHVS  480
HQDIAAAAAQ AAQLAQQQQH PAPPPQHPLF ADTLSAATAA ITSDPNFTAA LAAAISSIMG  540
GGSQPNNANN ASNAAAATST SNTNKTSSFP GN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-117	WRKY family protein