PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019170168.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 283aa MW: 30855.4 Da PI: 6.1676

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019170168.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	28.5	3.2e-09	89	137	4	51
XCHHHCH.HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrk.qkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 +k+e+++ NReA r++R++Kka+ + Le++v L a N++L k+l+ XP_019170168.1 89 DKKEKKRpLGNREAVRKYREKKKARAALLEDEVVRLRALNQQLLKRLQG 137 4555555389***********************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MEDGELEFSN QEMLSSSNFC EFPDSNSYMD SFLNEILKDT HACTHAHTCN PPGPDNSHTH 60 TCYHVHTKIV PAPSEEDKAP SDDTAESVDK KEKKRPLGNR EAVRKYREKK KARAALLEDE 120 VVRLRALNQQ LLKRLQGQAV LEAEVARLKC LLVDIRGRIE GEIGSFPYEK QQVKNRDAYQ 180 DLVNPTALPG GGGGAYVMNP CNMQCNDPLY CLQPGSEGGG VSSEGTTLNN QGLFNNCDFE 240 SLQCLGNQTS SGFKELPGCG VGNSKPANVS GGSKKKTRSA TAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35040.1	2e-83	bZIP family protein