PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019170060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | SBP | ||||||||
Protein Properties | Length: 140aa MW: 15940.7 Da PI: 7.8313 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 136.2 | 1e-42 | 56 | 131 | 2 | 77 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqve+C++d+++ak yhrrhkvCe+h+kap+vl++g++qrfCqqCsrfhel +fDe+krsCrrrLa+hnerrr+ + XP_019170060.1 56 CQVEDCTTDMTDAKPYHRRHKVCEIHAKAPSVLINGVQQRFCQQCSRFHELAQFDEAKRSCRRRLAGHNERRRRIT 131 *************************************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence |
METSKPEGKR SINETDSVAE GGEDEDEDVE EDNKKKRALT LSGRKLTGGG STQLFCQVED 60 CTTDMTDAKP YHRRHKVCEI HAKAPSVLIN GVQQRFCQQC SRFHELAQFD EAKRSCRRRL 120 AGHNERRRRI TYDPRGEGST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33810.1 | 9e-44 | SBP family protein |