PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019169700.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 348aa MW: 38286.7 Da PI: 8.0427

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019169700.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	174	4.4e-54	16	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLkkk+++ +l++ ++i+evd+yk++Pw+Lp+k+k +e+ewyfFs+rd+ky++g+r+nra++sgyWkatg+dk++l+ XP_019169700.1 16 LPPGFRFHPTDEELVVHYLKKKTASLPLPV-TIIAEVDLYKFDPWELPSKAKFGEQEWYFFSPRDRKYPNGTRPNRAATSGYWKATGTDKPILTC 109 79**************************.89***********99999***********************************987 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++ g+kk Lvfy+g+ pkg kt+Wvmheyrl XP_019169700.1 110 nGTQKAGVKKALVFYRGKPPKGMKTNWVMHEYRL 143 57788*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MESTADSRSD SGHPRLPPGF RFHPTDEELV VHYLKKKTAS LPLPVTIIAE VDLYKFDPWE 60 LPSKAKFGEQ EWYFFSPRDR KYPNGTRPNR AATSGYWKAT GTDKPILTCN GTQKAGVKKA 120 LVFYRGKPPK GMKTNWVMHE YRLPDNVVNS MTASSAHRPL GDDIVNKKSS LRLDDWVLCR 180 IFKKNGSSRP VESGGRGDPT EDATVATSTS LDGCGGGGSD HQNPNSRASR GLSFGDFFEI 240 NNAHNLYNGT MMSGGINGTQ TSWDSPRDQT CMAMGITAAP PRIDEDHHHH EAANNNAIME 300 GSNSFISLLN QLSPNDSATL NNNVQTGLGV SIAEGVLHQP YQLSWLKH

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MESTADSRSD SGHPRLPPGF RFHPTDEELV VHYLKKKTAS LPLPVTIIAE VDLYKFDPWE  60
LPSKAKFGEQ EWYFFSPRDR KYPNGTRPNR AATSGYWKAT GTDKPILTCN GTQKAGVKKA  120
LVFYRGKPPK GMKTNWVMHE YRLPDNVVNS MTASSAHRPL GDDIVNKKSS LRLDDWVLCR  180
IFKKNGSSRP VESGGRGDPT EDATVATSTS LDGCGGGGSD HQNPNSRASR GLSFGDFFEI  240
NNAHNLYNGT MMSGGINGTQ TSWDSPRDQT CMAMGITAAP PRIDEDHHHH EAANNNAIME  300
GSNSFISLLN QLSPNDSATL NNNVQTGLGV SIAEGVLHQP YQLSWLKH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	1e-100	NAC family protein