PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019169393.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family BES1
Protein Properties Length: 326aa    MW: 35360.4 Da    PI: 8.0476
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019169393.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822215.71.1e-6621451148
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     ++++r ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+e+++++gss s+sp+ss+q
  XP_019169393.1   2 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCKEAGWIVEEDGTTYRKGCKPTERMDIMGSSVSVSPCSSYQ 96 
                     5899******************************************************************************************* PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvss 148
                             +s+ +sy++sp+sssfpsp+s+  i+++++    +sl+p+l++ls+ ss
  XP_019169393.1  97 --------PSQGPSYNPSPASSSFPSPVSSRYITNNNNdtdpNSLIPWLKNLSSGSS 145
                     ........9*********************999998889999*********998443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCKEAG  60
WIVEEDGTTY RKGCKPTERM DIMGSSVSVS PCSSYQPSQG PSYNPSPASS SFPSPVSSRY  120
ITNNNNDTDP NSLIPWLKNL SSGSSPSSSK LPHHLYIPGG SISAPVTPPL SSPTARTPRM  180
NDNWDDPKVN SAWPNQHYAF LPSSTPQSPG CLTPPDSGWL SGVQTPQDGP SSPTFSLVSP  240
NPFGFKEPLS NGGSRMWTPG QSGTCSPAVA AALDRSADVP MSDAIQAEFA FGSNAMGIVK  300
PWEGERIHEE CITDDLELTL GNSNTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-106BES1 family protein