PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019169107.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | AP2 | ||||||||
Protein Properties | Length: 425aa MW: 47094.2 Da PI: 8.3126 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.9 | 2.2e-17 | 71 | 130 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g XP_019169107.1 71 SVYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 130 78*******************766644468557*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 425 aa Download sequence |
MASSSSEPTA KPEGSSGNDV CGGETSETAG PTGSDQLSLY RVLKKAKKER VCTAKERISK 60 MPPCTAGKRS SVYRGVTRHR WTGRYEAHLW DKSTWNQNQN KKGKQVYLGA YDDEEAAARA 120 YDLAALKYWG PGTLINFPVT DYTRDLEEMQ NLSREDYLAS LRRKSSGFSR GISKYRPLSS 180 SRWDSQFGRL QGADYFSSKH HGGDVTADNE YVAGYCMDQK IDLSSYIKWW GASKARQADS 240 YVKGTSEETK HGCSEDTGNE ASELAVQPTE PYEMPRLGLS QKGKSHKSST TSAMSILSQC 300 AAYKNLQEKV AKKKEKVEND ENENKNTINK IDYGKTIEKS IHDAGNERLG ALFGSSVGLT 360 INRNIHPLTP ILSAPLLTNY NSIDALTDPV LWTSLVPVFP SGSSRATEVT KHESGSDYTF 420 FQQED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41710.1 | 1e-131 | AP2 family protein |