PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019169031.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 222aa MW: 25582 Da PI: 8.3424 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.4 | 5.8e-19 | 68 | 120 | 5 | 57 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++t++q++ Le F+ n +++ +++ +LA++lgL+ rqV +W+qN+Ra++k+ XP_019169031.1 68 KRLTQDQVRLLEISFKANTKLDPDRKSQLAQELGLPPRQVAIWYQNKRARWKN 120 579************************************************95 PP | |||||||
2 | HD-ZIP_I/II | 109.8 | 1.9e-35 | 67 | 157 | 3 | 93 |
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +rl+++qv+lLE sF++++kL+p+rK++la+eLgl prqva+W+qn+RAR+k++ lE+d++a++++++ +++en+rLe+ev++Lreel++ XP_019169031.1 67 NKRLTQDQVRLLEISFKANTKLDPDRKSQLAQELGLPPRQVAIWYQNKRARWKNQSLEVDHKAMQQRLNGVAAENQRLEREVHRLREELSR 157 69*************************************************************************************9975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MKTMATISSS TFFIFLINLE VTFNLILSTY FYICLVESFL FLHHHQTSRM DYFNSQQARK 60 TLLKCHNKRL TQDQVRLLEI SFKANTKLDP DRKSQLAQEL GLPPRQVAIW YQNKRARWKN 120 QSLEVDHKAM QQRLNGVAAE NQRLEREVHR LREELSRTQE MLFSLNATAY SSLSSSGDDG 180 GSCSDLLHDS KDLYACLIDD HEGQIGKSAD AHNFFRLAGP HG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53980.1 | 2e-23 | HD-ZIP family protein |