PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019168424.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 436aa MW: 49679.2 Da PI: 5.2464

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019168424.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	104.2	1.7e-32	56	195	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....s 80 lp+G++F+P+d+e+v +L +k+ +++ + +e+i++vd i++++P++Lp +k + + +fF+++ k+y+tg+rk+r+++ + XP_019168424.1 56 LPRGVKFDPSDQEIV-WHLIAKIGAEDlqphpfI--DEFIPTVDedegICYTHPQNLP-GIKMDGSCSHFFHRAIKAYNTGTRKRRKIHgdnfgD 146 799**********.778899888886665332..334655544556******.666677888**************865555558 PP NAM 81 gyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +W++tg++k+vl +g ++g+kk++v+y ++ k+ekt+Wvmh+y+l XP_019168424.1 147 VRWHKTGRTKPVLL-DGVQKGCKKIMVLYvtPAKGDKPEKTNWVMHQYHL 195 88********.99********7734555666*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MARQAWLVDP NRLATKILSA SSDPKRTNWK SNPTKACPNC QYRIDNSDVT HEWPGLPRGV 60 KFDPSDQEIV WHLIAKIGAE DLQPHPFIDE FIPTVDEDEG ICYTHPQNLP GIKMDGSCSH 120 FFHRAIKAYN TGTRKRRKIH GDNFGDVRWH KTGRTKPVLL DGVQKGCKKI MVLYVTPAKG 180 DKPEKTNWVM HQYHLGTSED ERDGEYVISK VYYQQQQQVK HNEKSECQSP KGHECLTVKV 240 DPVTPKSVTP EPPLTERRFS SSDAVSSTPA AYSSSNIQEV NYIEDHMETP FQKSGNHDLI 300 TENQIDEMEV KNENENEAGD DPKWYEIGSQ NIMDSQQLAE YISLCDEFIL SQSPNREDQQ 360 NHKEKKCKAR LSDHYACLGA EVLKKDLEEC QDYELDQANI ILDTPPDFRL SQLDFPSQDS 420 FVAFGGHKIG SEEQGD

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MARQAWLVDP NRLATKILSA SSDPKRTNWK SNPTKACPNC QYRIDNSDVT HEWPGLPRGV  60
KFDPSDQEIV WHLIAKIGAE DLQPHPFIDE FIPTVDEDEG ICYTHPQNLP GIKMDGSCSH  120
FFHRAIKAYN TGTRKRRKIH GDNFGDVRWH KTGRTKPVLL DGVQKGCKKI MVLYVTPAKG  180
DKPEKTNWVM HQYHLGTSED ERDGEYVISK VYYQQQQQVK HNEKSECQSP KGHECLTVKV  240
DPVTPKSVTP EPPLTERRFS SSDAVSSTPA AYSSSNIQEV NYIEDHMETP FQKSGNHDLI  300
TENQIDEMEV KNENENEAGD DPKWYEIGSQ NIMDSQQLAE YISLCDEFIL SQSPNREDQQ  360
NHKEKKCKAR LSDHYACLGA EVLKKDLEEC QDYELDQANI ILDTPPDFRL SQLDFPSQDS  420
FVAFGGHKIG SEEQGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-159	NAC family protein