PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019168410.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Nin-like

Protein Properties

Length: 974aa MW: 106219 Da PI: 5.2767

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019168410.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.7	1.1e-28	582	633	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk +gvc+T+LKriCRq+GI+RWP+Rki+++ XP_019168410.1 582 AEKHVSLSVLQQYFSGSLKDAAKAIGVCPTTLKRICRQHGISRWPSRKINKV 633 5899**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 974 aa Download sequence
MEGDEVSLDG TKCSTPDDSF NVSAMDIMNF DAYAGWCNSP ATMDQMLASF AFSPLTPMGY 60 TQFDGLNYTE HSNGTFPMMD AADTIGSSEG GGEKINFQQN DQLNSLVSST DVNDSVANAK 120 KNQGQNCVVD FGSPMILKSP SEPLAEKMLT ALGLFKGSSG GGILAQVWFP MKEGDKFFLS 180 TYEQPYLLDH VLAGYREVSR KFTFDAETKP GSVLGLPGRV FSSRIPEWTS NIAYYRETEY 240 LRIHHAVSHE VRGSIALPVF EDDQVETPCC AVLEVVTVKE KPDFDSEIEK VCRALQAVNL 300 RSIAPPSLSP QCLSTNQKAA LAEITDVLRA VCHAHRLPLA LTWIPCSYVR GDSDDIRRVL 360 FKGCIENSIE KCVLCIESTA CYISDKEMVG FVHACTEHYL EEGQGIVGKA LQSNHPFFYP 420 DVKEYHISEY PLAHHARKFG LNAAVAIRLR STFTGNADYI LEFFLPVNMK GSTEQQLLLN 480 NLSGTMQRIC KTLRTVSDAE LKGGDGSKFG LQNASNASVP NLPPFTLSRR NSQHSLLDSA 540 LDPTDEVHLN VSGSESSGTG ADGTHQEKTG PRRQMEKKRS TAEKHVSLSV LQQYFSGSLK 600 DAAKAIGVCP TTLKRICRQH GISRWPSRKI NKVNRSLKKI QTVLESVQGV EGGLKFDPTT 660 GGLLAAGSII QDFDTQKSAL FPCKDVSKDK DSLIQDAGQP ASCFDGGSPI IKMEEDCPNL 720 LRPSSYKGEH KSTLDCYDSK LAALDAGPSW PASMNNIPWT GSGNAALDSS LIKGSSSRWG 780 LNNSNLKSEN SDSRFVSQWS SSMVVGDETE AKMKSANQVA GDDGVGEHNQ PTSSSMTDSS 840 NGSGSMMNGS SSSSPSFGEP KHLKTEVSCE DSGSKMTVKA TYKEDTVRFK FDTSAGCSRL 900 YEEVARRFQL QNGTFQLKYL DDEEEWVMLV SDADLQECIE ILDFLGTRTV KFLVRDASCA 960 MGSSGSSNCF LTTT

Sequence ? help Back to Top

Protein Sequence Length: 974 aa Download sequence

MEGDEVSLDG TKCSTPDDSF NVSAMDIMNF DAYAGWCNSP ATMDQMLASF AFSPLTPMGY  60
TQFDGLNYTE HSNGTFPMMD AADTIGSSEG GGEKINFQQN DQLNSLVSST DVNDSVANAK  120
KNQGQNCVVD FGSPMILKSP SEPLAEKMLT ALGLFKGSSG GGILAQVWFP MKEGDKFFLS  180
TYEQPYLLDH VLAGYREVSR KFTFDAETKP GSVLGLPGRV FSSRIPEWTS NIAYYRETEY  240
LRIHHAVSHE VRGSIALPVF EDDQVETPCC AVLEVVTVKE KPDFDSEIEK VCRALQAVNL  300
RSIAPPSLSP QCLSTNQKAA LAEITDVLRA VCHAHRLPLA LTWIPCSYVR GDSDDIRRVL  360
FKGCIENSIE KCVLCIESTA CYISDKEMVG FVHACTEHYL EEGQGIVGKA LQSNHPFFYP  420
DVKEYHISEY PLAHHARKFG LNAAVAIRLR STFTGNADYI LEFFLPVNMK GSTEQQLLLN  480
NLSGTMQRIC KTLRTVSDAE LKGGDGSKFG LQNASNASVP NLPPFTLSRR NSQHSLLDSA  540
LDPTDEVHLN VSGSESSGTG ADGTHQEKTG PRRQMEKKRS TAEKHVSLSV LQQYFSGSLK  600
DAAKAIGVCP TTLKRICRQH GISRWPSRKI NKVNRSLKKI QTVLESVQGV EGGLKFDPTT  660
GGLLAAGSII QDFDTQKSAL FPCKDVSKDK DSLIQDAGQP ASCFDGGSPI IKMEEDCPNL  720
LRPSSYKGEH KSTLDCYDSK LAALDAGPSW PASMNNIPWT GSGNAALDSS LIKGSSSRWG  780
LNNSNLKSEN SDSRFVSQWS SSMVVGDETE AKMKSANQVA GDDGVGEHNQ PTSSSMTDSS  840
NGSGSMMNGS SSSSPSFGEP KHLKTEVSCE DSGSKMTVKA TYKEDTVRFK FDTSAGCSRL  900
YEEVARRFQL QNGTFQLKYL DDEEEWVMLV SDADLQECIE ILDFLGTRTV KFLVRDASCA  960
MGSSGSSNCF LTTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	0.0	Nin-like family protein